DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and Lama5

DIOPT Version :9

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:XP_006500638.1 Gene:Lama5 / 16776 MGIID:105382 Length:3745 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 63..286 CDD:278484
EGF_Lam 287..343 CDD:238012
Laminin_EGF 355..415 CDD:278482
Laminin_EGF 418..475 CDD:278482
EGF_Lam 477..526 CDD:238012
EGF_Lam 529..567 CDD:214543
EGF_Lam 789..834 CDD:214543
Laminin_EGF 837..885 CDD:278482
Laminin_EGF 883..930 CDD:278482
Laminin_EGF 933..988 CDD:278482
Laminin_EGF 991..1043 CDD:278482
Laminin_EGF 1043..1091 CDD:278482
Laminin_EGF 1094..1142 CDD:278482
Laminin_EGF 1142..1190 CDD:278482
COG6 1212..>1398 CDD:303003
TelA 1439..1782 CDD:226371
ApoLp-III_like 1545..1702 CDD:304399
Lama5XP_006500638.1 Laminin_N 59..303 CDD:365840
EGF_Lam 304..352 CDD:238012
EGF_Lam 363..426 CDD:238012
EGF_Lam 433..474 CDD:238012
EGF_Lam 500..547 CDD:214543
EGF_Lam 546..589 CDD:238012
Laminin_EGF 593..640 CDD:365839
Laminin_EGF 638..685 CDD:365839
EGF_Lam 682..724 CDD:238012
EGF_Lam 781..832 CDD:238012
EGF_Lam 833..>872 CDD:238012
Laminin_EGF 1443..1491 CDD:365839
Laminin_EGF 1533..1584 CDD:365839
Laminin_EGF 1582..1630 CDD:365839
Laminin_B 1694..1830 CDD:365838
EGF_Lam 1864..>1900 CDD:238012
Laminin_EGF 1915..1968 CDD:365839
EGF_Lam 1970..2023 CDD:238012
EGF_Lam 2025..2069 CDD:214543
EGF_Lam 2071..2117 CDD:238012
Laminin_EGF 2119..>2147 CDD:365839
Laminin_I 2194..2452 CDD:310534
DUF3584 <2355..>2618 CDD:378817
Laminin_II 2642..2764 CDD:368703
LamG 2783..2912 CDD:214598
LamG 2969..3130 CDD:214598
LamG 3182..3300 CDD:214598
LamG 3364..3522 CDD:238058
LamG 3569..3696 CDD:214598
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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