Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032506.2 | Gene: | Lama1 / 16772 | MGIID: | 99892 | Length: | 3083 | Species: | Mus musculus |
Alignment Length: | 2224 | Identity: | 543/2224 - (24%) |
---|---|---|---|
Similarity: | 846/2224 - (38%) | Gaps: | 668/2224 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 IVLALLSWQWDPVDSQRPPQHGRRDRPKYPPNKFIKTHPCERSSCYPATGNLLIGRENRLTASST 74
Fly 75 CGLHSPERFC-ILSHLQDK-----KCFLCDTREETKHDPYKNHRIGQIIYKTKPGTNIPTWWQS- 132
Fly 133 --ENGKEN--ATIQLDLEAEFHFTHLIITFTTF-RPAAMYIERSFDFGQTWHIYRYFAY---DCK 189
Fly 190 ESFP-----GVPTVLENITDVMCTSRYSNVEPSRNGEVIFRVLPPNINVTDPYAEHVQ-NQLKMT 248
Fly 249 NLRIQ---------MTKLHKLGDNLLDSRLENEEKYYYGISNMVVRGSCSCYGHASQCLPLDPAF 304
Fly 305 SQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDHAVSCHFDEA 369
Fly 370 VF-------TASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSSD 427
Fly 428 DGIC---DSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLNNS 489
Fly 490 GCVMRTGECKCKKYVTGKDCNQCMPETYGLSE-SPEGCSLCNCDAGGSYDNYCDVISGQCRCRPH 553
Fly 554 MTGRSCSQPKQNYFIPLLPEVHEAEVVDECISYGANGNCSLVAETPDGSFTGIGFTRVPE---NS 615
Fly 616 ELVFTVGDIPRSMPYDAVIRYQSTSRGDWENAFITLVRPDQVDPEGGCGELAAATSSE--TRIPF 678
Fly 679 SLPDRSRQVVALNEVCLEAGKVYKFRIYFERKRHDVDSPTATILVDSLTLIPRIDVTPIFQGSVL 743
Fly 744 ADIRKKDYEKYN-CKSSLYDMNYKSDPKCQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGY 807
Fly 808 CQCKPNVVGRQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQP 872
Fly 873 GYWNFPECRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPE 937
Fly 938 TVASGLAHADGCSLDTRNNNMLCH-----------CQEGYSGSRCEICADNFFGNPD-NGGTCSK 990
Fly 991 CECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDAL-QQNCQQCECDFLGTNNTI 1054
Fly 1055 AHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGF 1119
Fly 1120 GGRACNQCQ----------------AH-----------------------------YWG-NPNEK 1138
Fly 1139 CQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQFPHCSPCGECF------NNWD 1197
Fly 1198 L---ILSALEDATTAT------------------ILRAKEIKQVGATGAYTSEFSELDKKLQ-HI 1240
Fly 1241 RNLLQNTS-------VS------------------LVDIE-------------KLDYETQSLRDQ 1267
Fly 1268 LQASHGRLSETEQNLDDIYNSL--SLSGVELESLQNHSRL---VQQLSKELKENGIQLQESNIEG 1327
Fly 1328 ALNLTRHAYERVSNLSTLKDEANELASNTD-----------RNCKRVENLSNKIQAEADDLANNN 1381
Fly 1382 K---LIE-------------------DYRAELTS---------LTSQIP-ELNN----------- 1403
Fly 1404 ----------------------QVCGKPGD--PC--------------------DSLC------- 1417
Fly 1418 -------------------GG--------------AGCGHCGGFLSCEHGAK-THSEEAL----- 1443
Fly 1444 ------KVAKDAETAITSKKDQADQTIRAL-----TQAKLNASEAYEKAKRGFEQSERYLNQTN- 1496
Fly 1497 ----ANIKL------AENLFIALN---------NFQENKTASPSESKELAQKTLDLDLKLEPEEI 1542
Fly 1543 ETLGDQINR----AVSSL----KNVEAII----------------YRTKPDLDRVNNLQSIANAT 1583
Fly 1584 KEKADKILDSANSVV----ESLAAADESQGKAKDAIQQANSNIELAGQDLEKIDEETYSAEAPAN 1644
Fly 1645 NTAQQVEK-------------------------------LAKKV-------------QKLQNNIM 1665
Fly 1666 KNDRDAKEITKEAGSVKLEAMRARGEANNLQSATSATN-----QTLTDRASR------------- 1712
Fly 1713 --SENARERAKQLLQRAS---KLTVDTNAKLKDLNDLQTVYLNKNQQLL-RLQAEIGPLNKELNE 1771
Fly 1772 HLIHIKERGSHYRQ 1785 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 70/252 (28%) |
EGF_Lam | 287..343 | CDD:238012 | 21/55 (38%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 22/66 (33%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 18/59 (31%) | ||
EGF_Lam | 477..526 | CDD:238012 | 22/49 (45%) | ||
EGF_Lam | 529..567 | CDD:214543 | 6/37 (16%) | ||
EGF_Lam | 789..834 | CDD:214543 | 9/44 (20%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 5/47 (11%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 22/46 (48%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 24/66 (36%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 30/52 (58%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 17/47 (36%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 22/93 (24%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 20/47 (43%) | ||
COG6 | 1212..>1398 | CDD:303003 | 50/271 (18%) | ||
TelA | 1439..1782 | CDD:226371 | 92/474 (19%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 40/228 (18%) | ||
Lama1 | NP_032506.2 | LamNT | 25..275 | CDD:214532 | 77/290 (27%) |
EGF_Lam | 277..324 | CDD:238012 | 22/56 (39%) | ||
Laminin_EGF | 404..463 | CDD:278482 | 21/64 (33%) | ||
Laminin_EGF | 461..507 | CDD:278482 | 21/48 (44%) | ||
Laminin_B | 575..714 | CDD:306547 | 33/203 (16%) | ||
EGF_Lam | 748..796 | CDD:238012 | 23/58 (40%) | ||
Laminin_EGF | 798..853 | CDD:278482 | 24/66 (36%) | ||
EGF_Lam | 855..907 | CDD:238012 | 29/51 (57%) | ||
Laminin_EGF | 909..955 | CDD:278482 | 17/47 (36%) | ||
EGF_Lam | 958..1002 | CDD:214543 | 14/44 (32%) | ||
EGF_Lam | 1004..1049 | CDD:238012 | 6/44 (14%) | ||
Laminin_EGF | 1051..1099 | CDD:278482 | 22/49 (45%) | ||
Laminin_EGF | 1097..1154 | CDD:278482 | 11/59 (19%) | ||
Cell attachment site | 1147..1149 | 1/1 (100%) | |||
Laminin_B | 1225..1367 | CDD:306547 | 31/149 (21%) | ||
Laminin_EGF | 1410..1456 | CDD:278482 | 6/45 (13%) | ||
Laminin_EGF | 1459..1513 | CDD:278482 | 5/53 (9%) | ||
EGF_Lam | 1516..>1553 | CDD:238012 | 8/36 (22%) | ||
Domain II and I | 1564..2123 | 91/461 (20%) | |||
Laminin_I | 1582..1837 | CDD:310534 | 51/258 (20%) | ||
DUF390 | <1827..>2064 | CDD:330463 | 38/194 (20%) | ||
Laminin_II | 2018..2152 | CDD:283628 | |||
LamG | 2136..2285 | CDD:238058 | |||
LamG | 2314..2470 | CDD:238058 | |||
LamG | 2495..2659 | CDD:238058 | |||
Laminin_G_1 | 2751..2880 | CDD:278483 | |||
LamG | 2900..3053 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |