DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and ntng2b

DIOPT Version :10

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:XP_073791807.1 Gene:ntng2b / 101885039 ZFINID:ZDB-GENE-110502-1 Length:1880 Species:Danio rerio


Alignment Length:394 Identity:103/394 - (26%)
Similarity:161/394 - (40%) Gaps:94/394 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRLIVVIVLALLSWQWDPVDSQRPPQHGRRDRPKYPPNKFIKTHPCERSSCYPATGNLLIGRENR 68
            |..::|.|||....|:|...|......|..               .|..:|.|...::......|
Zfish     7 LLYLLVHVLARARGQYDLCKSLVSTDEGAM---------------WEHYACQPKAQSMKEYMRIR 56

  Fly    69 LTASS-TCGLHSPERFCILSHLQDKKCFLCD-----TREETKHDPYKNHRIGQIIYKTKPGTNIP 127
            :.... ||| :.|||||.|     :..:||.     :..:..|.|.        :.:.:..:.:.
Zfish    57 VEPPGITCG-NPPERFCTL-----ENPYLCSDECDASNPDLAHPPQ--------LMQDRERSGLI 107

  Fly   128 TWWQSENGKE-----NATIQLDLEAEFHFTHLI-ITFTTFRPAAMYIERSFDFGQTWHIYRYFAY 186
            |:||:...:.     .|.|.|........|..| |||...||..|.:|:|.:||:||..|:|:|.
Zfish   108 TYWQTVTWRRYPQPLQANITLSWNKTLELTDDIQITFEYGRPTVMVLEKSLNFGRTWQPYQYYAD 172

  Fly   187 DCKESFPGVPT------VLENITDVMCTSRYSNVEPSRNGEVI-------FRVL--PPNINVTDP 236
            ||.::| .:|.      ...|...|:||.:||....|:|.:|:       |.:.  |..:|:...
Zfish   173 DCVDAF-NMPAGRVRDLNAANAMRVICTEQYSRWVGSKNEKVVRFEVRSRFAIFAGPRLLNMEGL 236

  Fly   237 YA-----EHVQNQLKMTNLRIQMTKLHKLG------DNLLDSRLENEEKYYYGISNMVVRGSCSC 290
            |.     :.:::....|:||:::.: ..||      ||||        ||:|.|||:.|...|.|
Zfish   237 YTRMESMKGLRDFFSFTSLRLRLLR-PALGGTYVQRDNLL--------KYFYAISNVEVLARCKC 292

  Fly   291 YGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKT-----N 350
            ..|:|||:.:|...            :|:|.|||.|.:|:.|:..:....|||.....|     |
Zfish   293 NLHSSQCVYMDGNL------------QCQCEHNTTGQDCQRCKKGYKAKTWKPGSYLPTPNGSPN 345

  Fly   351 ACKK 354
            .|.:
Zfish   346 TCSQ 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 54..286 CDD:459653 72/269 (27%)
EGF_Lam 287..343 CDD:238012 16/55 (29%)
Laminin_EGF 355..415 CDD:395007 103/394 (26%)
Laminin_EGF 418..475 CDD:395007
EGF_Lam 477..526 CDD:238012
EGF_Lam 529..567 CDD:214543
EGF_Lam 789..834 CDD:214543
Laminin_EGF 837..885 CDD:395007
Laminin_EGF 883..930 CDD:395007
Laminin_EGF 933..988 CDD:395007
Laminin_EGF 991..1035 CDD:395007
Laminin_EGF 1043..1091 CDD:395007
Laminin_EGF 1094..1142 CDD:395007
Laminin_EGF 1142..1190 CDD:395007
Mplasa_alph_rch 1228..>1771 CDD:275316
cc_DmLAMB1-like_C 1717..1786 CDD:411973
ntng2bXP_073791807.1 None
Blue background indicates that the domain is not in the aligned region.

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