Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005161783.1 | Gene: | lama3 / 101882184 | ZFINID: | ZDB-GENE-050208-475 | Length: | 1711 | Species: | Danio rerio |
Alignment Length: | 905 | Identity: | 199/905 - (21%) |
---|---|---|---|
Similarity: | 311/905 - (34%) | Gaps: | 286/905 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 962 CQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCEL 1026
Fly 1027 CKDGFFGDALQQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGC 1091
Fly 1092 ESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNP---NEKCQPCECDQFGAADFQ 1153
Fly 1154 CDRETGNCVCHEGIGGYKCNEC------------------ARGYIGQFPHCSPCGECFNNWDLIL 1200
Fly 1201 SALEDATTATILRAKEIKQVGATGAYTSEFSELDKKLQHIRNLLQNT--------------SVSL 1251
Fly 1252 VDIEKLDYETQSLRDQLQASHGRLSETEQNLDDIYNSLSLSGVELESLQNHSRLVQQLSKELKEN 1316
Fly 1317 GIQLQESNIEGALNLTRHAYERVSNLSTLKD-----EANELASNTDRN--CKRVENLSN----KI 1370
Fly 1371 QAEADDLANN--NKLIEDYRAELTSLTSQIPEL-NNQVCGKPGDPCDSLCGGAGCGHCGGFLSCE 1432
Fly 1433 HGAKTHSEEALKVAKDAETAITSKKDQADQTIRALTQAKLNASEAYEKAKRGFEQSERYLNQTNA 1497
Fly 1498 NIKLAENLFIALNNFQENKTASPSESKELAQKTLDLDLKLEPEEIETLGDQINRAVSSLKNVEAI 1562
Fly 1563 IYRTKPDLDRVNNLQSIANATKEKADKILDSANSVVESLAAADESQGKAKDAIQQANS---NIEL 1624
Fly 1625 AGQDLEKIDE--ETYSAEAPANNTAQQVEKLAKKVQKL-------QNNIMKNDRD-----AKE-- 1673
Fly 1674 ----------------ITKEAGSVKLEAMRARGEANNLQSATSATNQTLT----------DRASR 1712
Fly 1713 SEN-------------ARERAKQLLQRA--------SKLTVDTNAKL-----KDLNDLQT 1746 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | |
EGF_Lam | 287..343 | CDD:238012 | |||
Laminin_EGF | 355..415 | CDD:278482 | |||
Laminin_EGF | 418..475 | CDD:278482 | |||
EGF_Lam | 477..526 | CDD:238012 | |||
EGF_Lam | 529..567 | CDD:214543 | |||
EGF_Lam | 789..834 | CDD:214543 | |||
Laminin_EGF | 837..885 | CDD:278482 | |||
Laminin_EGF | 883..930 | CDD:278482 | |||
Laminin_EGF | 933..988 | CDD:278482 | 6/25 (24%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 21/51 (41%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 6/47 (13%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 13/50 (26%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 15/65 (23%) | ||
COG6 | 1212..>1398 | CDD:303003 | 44/212 (21%) | ||
TelA | 1439..1782 | CDD:226371 | 78/379 (21%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 41/191 (21%) | ||
lama3 | XP_005161783.1 | EGF_Lam | 95..141 | CDD:238012 | 20/50 (40%) |
Laminin_EGF | 143..196 | CDD:278482 | 19/98 (19%) | ||
TNFRSF | 167..231 | CDD:328932 | 23/67 (34%) | ||
Laminin_I | 268..495 | CDD:310534 | 55/268 (21%) | ||
CwlO1 | 448..710 | CDD:226400 | 71/338 (21%) | ||
Laminin_II | 691..819 | CDD:283628 | 25/130 (19%) | ||
LamG | 793..977 | CDD:238058 | 7/23 (30%) | ||
LamG | 1009..1149 | CDD:238058 | |||
LamG | 1197..1303 | CDD:238058 | |||
LamG | 1384..1515 | CDD:238058 | |||
LamG | 1540..1688 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |