Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031754867.1 | Gene: | lamb4 / 100485623 | XenbaseID: | XB-GENE-6050187 | Length: | 1848 | Species: | Xenopus tropicalis |
Alignment Length: | 1896 | Identity: | 658/1896 - (34%) |
---|---|---|---|
Similarity: | 997/1896 - (52%) | Gaps: | 245/1896 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQ-DKKCFLCDTREETKHDPYKN-- 110
Fly 111 -HRIGQII------YKTKPGTNIPTWWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMYI 168
Fly 169 ERSFDFGQTWHIYRYFAYDCKESFPGVPT-VLENITDVMCTSRYSNVEPSRNGEVIFRVLPPNIN 232
Fly 233 VTDPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDS-RLENEEKYYYGISNMVVRGSCSCYGHASQ 296
Fly 297 CLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDHA 361
Fly 362 VSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSS 426
Fly 427 DDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLNNSGC 491
Fly 492 VMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCRPHMTG 556
Fly 557 RSCSQPKQNYF-IPLLPEVHEAE------------------------------------------ 578
Fly 579 ----------VVDECISYGANGNCSLVAETP----DGSFTGIGFTRVPENSELVFTVGDIPRSMP 629
Fly 630 YDAVIRYQSTSRGDWENAFITLVRPDQVDPEGGCGELAAATSS-ETRIPFSLPDRSRQVVALNEV 693
Fly 694 CLEAGKVYKFRIYFERKRHDVDSPTATILVDSLTLIPRIDVTPIFQGSVLADIRK-------KDY 751
Fly 752 EKYNCKSSLYDMNYKSDPK-CQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVV 815
Fly 816 GRQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFPEC 880
Fly 881 RVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAH 945
Fly 946 ADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPDN-GGTCSKCECSNNVDLYDTGNCDRQT 1009
Fly 1010 GACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTN--NTIAH-------CDRFTGQCP 1065
Fly 1066 CLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAH 1130
Fly 1131 YWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQFPHCSPCGECFNN 1195
Fly 1196 WDLILSALEDATTATILRAKEI-----KQVGATGAYTSEFSELDKKLQHIRNLLQNTSVSLVDIE 1255
Fly 1256 KLDYETQSLRDQLQ----------ASHGRLSET----EQNLDDIYNSLSLSGVELESLQNHSRLV 1306
Fly 1307 QQLSKELKENGIQLQESNIEGALNLTRHAYERVSNLSTLKDEANELASNTDRNCKRVENLSNKIQ 1371
Fly 1372 AEADDLANNNKLIEDYRAELTSLTSQIPELNNQVCGKPGD-PCD-SLCGGAGC------GHCGGF 1428
Fly 1429 LSCEHGAKTHSEEALKVAKDAETAITS------KKDQADQTIRALTQ-AKLNASEAYEKAKRGFE 1486
Fly 1487 QSERYLNQTNANIKLAENLFIALNNF-----------------------QE-NKTASPSESKELA 1527
Fly 1528 QKTLDLDLKLEPEEIETLGDQINRAVSSL-KNVEAIIYRTKPDLDRVNNLQSIANATKEKADKIL 1591
Fly 1592 DSANSVVESLAAADESQGKAKDAIQQANSNIELAGQDLEKIDEETYSAEAPANNTAQQVE----- 1651
Fly 1652 --KLAKKVQKLQNNIMKNDRDAKEITKEAGSVKLEAMRARGEANNLQSATSATNQTLTDRASRSE 1714
Fly 1715 NARERAKQLLQRASKLTVDTNAKLKDLNDLQTVY--LNKNQQLLRLQAEIGPLNK--ELNEHLIH 1775
Fly 1776 IKERGSHYRQC 1786 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 110/234 (47%) |
EGF_Lam | 287..343 | CDD:238012 | 29/55 (53%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 30/59 (51%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 27/56 (48%) | ||
EGF_Lam | 477..526 | CDD:238012 | 21/48 (44%) | ||
EGF_Lam | 529..567 | CDD:214543 | 20/37 (54%) | ||
EGF_Lam | 789..834 | CDD:214543 | 25/44 (57%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 22/47 (47%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 21/46 (46%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 21/55 (38%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 26/51 (51%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 24/56 (43%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 18/47 (38%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 18/47 (38%) | ||
COG6 | 1212..>1398 | CDD:303003 | 37/204 (18%) | ||
TelA | 1439..1782 | CDD:226371 | 81/385 (21%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 36/164 (22%) | ||
lamb4 | XP_031754867.1 | Laminin_N | 46..280 | CDD:395009 | 114/242 (47%) |
EGF_Lam | 282..337 | CDD:238012 | 29/54 (54%) | ||
Laminin_EGF | 349..399 | CDD:395007 | 28/49 (57%) | ||
Laminin_EGF | 412..469 | CDD:395007 | 27/56 (48%) | ||
EGF_Lam | 472..521 | CDD:238012 | 21/48 (44%) | ||
EGF_Lam | 522..565 | CDD:238012 | 22/42 (52%) | ||
EGF_Lam | 830..875 | CDD:214543 | 25/44 (57%) | ||
Laminin_EGF | 878..926 | CDD:395007 | 22/47 (47%) | ||
EGF_Lam | 923..970 | CDD:238012 | 21/48 (44%) | ||
Laminin_EGF | <993..1028 | CDD:395007 | 14/34 (41%) | ||
Laminin_EGF | 1031..1075 | CDD:395007 | 22/43 (51%) | ||
Laminin_EGF | 1083..1140 | CDD:395007 | 24/56 (43%) | ||
EGF_Lam | 1143..1188 | CDD:214543 | 17/44 (39%) | ||
EGF_Lam | 1190..1239 | CDD:238012 | 19/48 (40%) | ||
SMC_prok_A | <1279..1384 | CDD:274009 | 23/129 (18%) | ||
Mplasa_alph_rch | 1483..>1838 | CDD:275316 | 80/375 (21%) | ||
cc_LAMB4_C | 1779..1848 | CDD:411972 | 19/72 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 303 | 1.000 | Domainoid score | I1381 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D42471at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002726 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |