Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826649.2 | Gene: | lamb3 / 100125073 | XenbaseID: | XB-GENE-983491 | Length: | 1157 | Species: | Xenopus tropicalis |
Alignment Length: | 1767 | Identity: | 400/1767 - (22%) |
---|---|---|---|
Similarity: | 599/1767 - (33%) | Gaps: | 659/1767 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQDKKCFLCDTREETKHDPYK--NH 111
Fly 112 RIGQIIYKTKPGTNI--PT----WWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMYIER 170
Fly 171 SFDFGQTWHIYRYFAYDCKESFP----GVPTVLENITDVMCTSRYSNVEPSRNGEVIFRVLPPNI 231
Fly 232 NVTDPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVVRGSCSCYGHASQ 296
Fly 297 CLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDHA 361
Fly 362 VSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSS 426
Fly 427 DDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLNNSGC 491
Fly 492 VMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCRPHMTG 556
Fly 557 RSCSQPKQNYFIPLLPEVHEAEVVDECISYGANGNCSLVAETPDGSFTGIGFTRVPENSELVFTV 621
Fly 622 GDIPRSMPYDAVIRYQSTSRGDWENAFITLVRPDQVDPEGGCGELAAATSSETRIPFSLPDRSRQ 686
Fly 687 VVALNEVCLEAGKVYKFRIYFERKRHDVDSPTATILVDSLTLIPRIDVTPIFQGSVLADIRKKDY 751
Fly 752 EKYNCKSSLYDMNYKSDPKCQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVG 816
Fly 817 RQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFPECR 881
Fly 882 VCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHA 946
Fly 947 DGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGA 1011
Fly 1012 CLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCD 1076
Fly 1077 QCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNPNEKCQP 1141
Fly 1142 CECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQFPHCSPCGECFNNWDLILSALEDA 1206
Fly 1207 TTATILRAKEIKQVGATGAYTSEFSELDKKLQHIRNLLQNTSVSLVDIEKLDYETQSLRDQLQAS 1271
Fly 1272 HGRLSETEQNLDDIYNSLSLSGVELESLQNHSRLVQQLSKELKENGIQLQESNIEGALNLTRHAY 1336
Fly 1337 ERVSNLSTLKD-EANELASNTDRNCKRV----ENLSNKIQAEADDLANNNKLIEDYRAELT--SL 1394
Fly 1395 TSQIPELNNQVC-GKPGDPC-DSLCGGAGCGHCGGFLSCE-----HGAKTHSEEALKVAKDAETA 1452
Fly 1453 ITSKKDQADQTIRALTQAKLNASEAYEKAKRGFEQSERYLNQTNANIKLAENLFIALNNFQENKT 1517
Fly 1518 ASPSESKELAQKTLDLDLKLEPEEIETLGDQINRAVSSLKNVEAIIYRTKPDLDRVNNLQSIANA 1582
Fly 1583 TKEKADKILDSANSVVESLAAADESQGKAKDAIQQANSNIELAGQDLEKIDEETYSAEAPANNTA 1647
Fly 1648 QQVEKLAKKVQKLQNNIMKNDRDAKEITKEAGSVKLEAMRARGEANNLQSATSATNQTLTDRASR 1712
Fly 1713 SEN---ARERAKQLLQRASKLTVDTNAKLKDLNDLQTVYLNKNQQLLRLQAEIGPLNKELNEHLI 1774
Fly 1775 HIKERGSHYRQC 1786 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 85/234 (36%) |
EGF_Lam | 287..343 | CDD:238012 | 28/55 (51%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 32/59 (54%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 28/56 (50%) | ||
EGF_Lam | 477..526 | CDD:238012 | 6/48 (13%) | ||
EGF_Lam | 529..567 | CDD:214543 | 0/37 (0%) | ||
EGF_Lam | 789..834 | CDD:214543 | 0/44 (0%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 0/47 (0%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 0/46 (0%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 0/54 (0%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 0/51 (0%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 24/47 (51%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 20/47 (43%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 20/47 (43%) | ||
COG6 | 1212..>1398 | CDD:303003 | 40/192 (21%) | ||
TelA | 1439..1782 | CDD:226371 | 70/345 (20%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 37/156 (24%) | ||
lamb3 | XP_012826649.2 | Laminin_N | 26..244 | CDD:395009 | 91/242 (38%) |
EGF_Lam | 245..302 | CDD:238012 | 29/57 (51%) | ||
EGF_Lam | 311..369 | CDD:238012 | 32/57 (56%) | ||
Laminin_EGF | 375..424 | CDD:395007 | 28/56 (50%) | ||
Laminin_EGF | 427..474 | CDD:395007 | 34/612 (6%) | ||
Laminin_EGF | 477..525 | CDD:395007 | 20/47 (43%) | ||
EGF_Lam | 525..569 | CDD:214543 | 19/43 (44%) | ||
Smc | <815..1149 | CDD:224117 | 65/337 (19%) | ||
cc_LAMB_C | 1087..1157 | CDD:424069 | 13/70 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |