Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001265728.1 | Gene: | lama2 / 100049705 | ZFINID: | ZDB-GENE-060119-1 | Length: | 3078 | Species: | Danio rerio |
Alignment Length: | 2262 | Identity: | 511/2262 - (22%) |
---|---|---|---|
Similarity: | 799/2262 - (35%) | Gaps: | 736/2262 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 VLALLSWQWDPVDSQRPPQHGRRDRPKYPPNKFIKTHPCERSSCYPATGNLLIGRENRLTASSTC 75
Fly 76 GLHSPERFC-ILSH-----LQDKKCFLCDTREETKHDPYKNHRIGQIIYKTKPGTNIPTWWQSE- 133
Fly 134 --NGKE--NATIQLDLEAEFHFTHLII-TFTTFRPAAMYIERSFDFGQTWHIYRYFAY---DCKE 190
Fly 191 SFPGVPTV----LENITDVMCTSRYSNVEPSRNGEVIFRVLPPNINVTDPYAEHVQNQLKMTNLR 251
Fly 252 IQMTKLHKLGDNLLDSRLEN--------EEKYYYGISNMVVRGSCSCYGHASQCLPLDPAFSQAD 308
Fly 309 NEDGMVHGR---CECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDHAVSCHFDEAV 370
Fly 371 FTA-------SGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSSDD 428
Fly 429 GICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLNNSGCVM 493
Fly 494 RTGECKCKKYVTGKDCNQCMPETYGLSES-PEGCSLCNCDAGGS--------YDNYCDV----IS 545
Fly 546 G----------QCRCRPHMTGRSCSQPKQNYFIPLLPEVHEAEVVDECISYGANGNCSLVAETPD 600
Fly 601 GSFTGIGFTRVPENSELVFTVGDIPRSMPYDAVIRYQSTSRGDWENAFITLVRPDQVDPEGGC-- 663
Fly 664 ----GE--LAAATSSETRIPFSLPD-----RSRQVVALNEVCLEAGKVYKFRIYFERKRHDVDSP 717
Fly 718 TATILVDSLTLIPRIDVTPIFQGSVLADIRKKDYEKYNCKSSLYDMNYKSDPKCQNLDNILSVFV 782
Fly 783 HDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGFGPEGCKACDCNSIGSKDK 847
Fly 848 YCDLITGQCQCVPNTYGRECNQCQPGYWNFPECRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCD 912
Fly 913 SCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADN 977
Fly 978 FFGNPD-NGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDAL-QQNC 1040
Fly 1041 QQCECDFLGTNNTI------------------------------------AHCDRF--------- 1060
Fly 1061 TGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACN 1125
Fly 1126 QCQAHYWGNP-NEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQFPHCSPC 1189
Fly 1190 -----GECFNNWDLI--LSALEDATTATILRAKEIKQ-----------------VGATGAY---- 1226
Fly 1227 TSEFSELDKKLQHIRNLL-QNTSVSLVD------------------------------------- 1253
Fly 1254 ---------------------------IEKLDYETQSL------RDQLQASH------GRLSETE 1279
Fly 1280 --------QNLDD------------IYNSLSLSGVELESLQNHSRLVQQLSKELKENGIQLQESN 1324
Fly 1325 I----------EGALNLT----RHAYERVSNL---------------------STLKDEANELAS 1354
Fly 1355 NTDRN-----CKR--------VENLSNKIQAEADDLAN--NNKLIEDYRAELTSLTSQIPELNNQ 1404
Fly 1405 VC-----------------GKPGDP------CDSLCGGAGCGHCGGFL----------------- 1429
Fly 1430 ------------------SCEH--------------------GAKTHSEE----ALKVAKDAE-T 1451
Fly 1452 AITSKKD-QADQTIRALTQAKLNASEAYEKAKRGFEQS--------ERYLNQTNANIK------- 1500
Fly 1501 ----------------LAENLFIALNN-FQENKTASPSESKELAQKTLDLDLKL-EPEEIETLGD 1547
Fly 1548 QINRAVSSLKNVEAIIYRTKPDLDRVNNLQSIANATKE-------KADKILDSANSVVESLAAAD 1605
Fly 1606 E-------SQGKAKDAIQQANSNIELAGQDLEKIDEETYSAE---APANNTAQQVEKLAKKVQKL 1660
Fly 1661 --------------QNNIMKNDR---DAKEITKEA--------GSVKLEAMRA-------RGEAN 1693
Fly 1694 NLQSATSATNQTLTDRASRSENARERAKQLLQR--------------------ASKL-------- 1730
Fly 1731 TVDTNAKLKDLNDLQTVYLNKNQQLLRLQAEIGPLNKELNEHLIHIKERGSH 1782 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 66/249 (27%) |
EGF_Lam | 287..343 | CDD:238012 | 22/58 (38%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 18/66 (27%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 15/56 (27%) | ||
EGF_Lam | 477..526 | CDD:238012 | 16/49 (33%) | ||
EGF_Lam | 529..567 | CDD:214543 | 11/59 (19%) | ||
EGF_Lam | 789..834 | CDD:214543 | 9/44 (20%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 5/47 (11%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 20/46 (43%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 19/55 (35%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 27/52 (52%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 19/92 (21%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 16/48 (33%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 21/52 (40%) | ||
COG6 | 1212..>1398 | CDD:303003 | 50/353 (14%) | ||
TelA | 1439..1782 | CDD:226371 | 97/458 (21%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 42/205 (20%) | ||
lama2 | NP_001265728.1 | LamNT | 21..270 | CDD:214532 | 72/283 (25%) |
EGF_Lam | 272..319 | CDD:238012 | 22/59 (37%) | ||
Laminin_EGF | 399..456 | CDD:278482 | 18/61 (30%) | ||
Laminin_EGF | 454..500 | CDD:278482 | 16/48 (33%) | ||
Laminin_B | 567..695 | CDD:278481 | 30/204 (15%) | ||
EGF_Lam | 742..790 | CDD:238012 | 20/47 (43%) | ||
Laminin_EGF | 792..847 | CDD:278482 | 19/55 (35%) | ||
EGF_Lam | 849..901 | CDD:238012 | 25/51 (49%) | ||
EGF_Lam | 903..948 | CDD:214543 | 3/44 (7%) | ||
EGF_Lam | 951..995 | CDD:214543 | 16/44 (36%) | ||
EGF_Lam | 997..1042 | CDD:238012 | 15/47 (32%) | ||
Laminin_EGF | 1044..1092 | CDD:278482 | 21/48 (44%) | ||
Laminin_EGF | 1090..1147 | CDD:278482 | 8/56 (14%) | ||
LamB | 1212..1340 | CDD:214597 | 15/128 (12%) | ||
Laminin_EGF | 1397..1443 | CDD:278482 | 7/45 (16%) | ||
EGF_Lam | 1446..1495 | CDD:214543 | 13/58 (22%) | ||
Laminin_I | 1526..1780 | CDD:283627 | 45/259 (17%) | ||
zf-C4H2 | 1698..>1808 | CDD:287156 | 24/115 (21%) | ||
Tropomyosin_1 | 1892..2053 | CDD:289488 | 31/138 (22%) | ||
Laminin_II | 1967..2100 | CDD:283628 | 17/63 (27%) | ||
Laminin_G_1 | 2103..2242 | CDD:278483 | |||
LamG | 2268..2425 | CDD:238058 | |||
LamG | 2452..2627 | CDD:238058 | |||
Laminin_G_1 | 2750..2878 | CDD:278483 | |||
LamG | 2898..3050 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |