DRSC/TRiP Functional Genomics Resources

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Protein Alignment r2d2 and STAU2

DIOPT Version :10

Sequence 1:NP_609152.1 Gene:r2d2 / 34066 FlyBaseID:FBgn0031951 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001157852.1 Gene:STAU2 / 27067 HGNCID:11371 Length:570 Species:Homo sapiens


Alignment Length:317 Identity:71/317 - (22%)
Similarity:121/317 - (38%) Gaps:56/317 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NKSAVSALQEFCARTQINLPTYSFIPGEDG-----GYVCKVELLEIEALGNGRSKRDAKHLAASN 62
            |||.:|.:.|...:.  |:|....:..|.|     .:|.:|.:.|..|.|.|.||:.:|..||:.
Human   205 NKSEISLVFEIALKR--NMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATT 267

  Fly    63 ILRKIQLLPGIHGLMK--------DSTVGDLDEELTNLNRDMVKELRDYCVRREMPLPCIEVVQQ 119
            :|::::.||.:..:.|        ..|:.....|. ....:.:..|......::...|...::.:
Human   268 VLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEY-GQGMNPISRLAQIQQAKKEKEPDYVLLSE 331

  Fly   120 SGTPSAPEFVACCSVASIVRYGKSDKKKDARQRAAIEMLALISSNSDNLRPDQMQVASTSK---- 180
            .|.|...|||....|.:.|..|....||.|::.||..||..:...:.....||::....:|    
Human   332 RGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTNLQDQLEKTGENKGWSG 396

  Fly   181 -------------LKVVDMEESM-EELEALRRKKF--TT--YWELKEAGSVDHTGMRLCDRHNYF 227
                         ..::.:...: :|:||.|.|..  ||  |...|:......:          |
Human   397 PKPGFPEPTNNTPKGILHLSPDVYQEMEASRHKVISGTTLGYLSPKDMNQPSSS----------F 451

  Fly   228 KNFYPTLKKEAIEA----INSDEYESSKDKAMDVMSSLKITPKISEVESSSLVPLLS 280
            .:..||....|..|    :|.   .||..:|:.:..| ..||..|.|:.|..:..|:
Human   452 FSISPTSNSSATIARELLMNG---TSSTAEAIGLKGS-SPTPPCSPVQPSKQLEYLA 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
r2d2NP_609152.1 DSRM 6..68 CDD:214634 18/66 (27%)
DSRM_SF 102..158 CDD:380679 14/55 (25%)
STAU2NP_001157852.1 DSRM_SF 3..70 CDD:444671
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..94
DSRM_STAU2_rpt2 98..179 CDD:380711
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..203
DSRM_STAU2_rpt3 206..272 CDD:380713 20/67 (30%)
Nuclear localization signal 1. /evidence=ECO:0000250 273..291 3/17 (18%)
DSRM_STAU2_rpt4 304..389 CDD:380715 19/84 (23%)
Nuclear localization signal 2. /evidence=ECO:0000250 373..412 3/38 (8%)
Required for dendritic transport. /evidence=ECO:0000250 381..570 28/138 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..409 1/21 (5%)
Staufen_C 461..523 CDD:465131 13/48 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..570
Blue background indicates that the domain is not in the aligned region.

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