Protein Alignment r2d2 and rde-4

DIOPT Version :9

• Sequence 1: NP_001162903.1
• Gene: r2d2 / 34066
• FlyBaseID: FBgn0031951
• Length: 311
• Species: Drosophila melanogaster
• Sequence 2: NP_499265.1
• Gene: rde-4 / 176438
• WormBaseID: WBGene00004326
• Length: 385
• Species: Caenorhabditis elegans
• Alignment Length: 315
• Identity: 68/315 - (21%)
• Similarity: 119/315 - (37%)
• Gaps: 84/315 - (26%)

  Fly     4 KSAVSALQEFCARTQINLPTYSFIPGEDGGYVCKVELLEIEALGNGRSKRDAKHLAASNILRKIQ 68
            |:.:..|:|.........||:..:...: |:...:.|.||...|...||:.|:..||...|||:
 Worm    42 KTPLMVLEEAAKAVYQKTPTWGTVELPE-GFEMTLILNEITVKGQATSKKAARQKAAVEYLRKV- 104

  Fly    69 LLPGIH------GLMKDSTVGDLD------EELTNLNRDMVKE---------------------- 99
            :..|.|      |..|:..:.::|      |||.....|.|::
 Worm   105 VEKGKHEIFFIPGTTKEEALSNIDQISDKAEELKRSTSDAVQDNDNDDSIPTSAEFPPGISPTEN 169

  Fly   100 ----LRDYCVRREMPLPCIEVVQQSGTPSAPEFVACCSVASIVRYGKSDKKKDARQRAAIEMLAL 160
                |::...:.::..|   :.:.|.......|:..|::.:....|...|||||:..||..|...
 Worm   170 WVGKLQEKSQKSKLQAP---IYEDSKNERTERFLVICTMCNQKTRGIRSKKKDAKNLAAWLMWKA 231

  Fly   161 ISSNSDNLRPDQMQVASTSKLKVVDMEESMEELEALRRKKFTTYWELKEAGSVDHTGMRLCDRHN 225
            :....::|....|          ||:.|::||.|.|        .|:::..|      ::.|:|:
 Worm   232 LEDGIESLESYDM----------VDVIENLEEAEHL--------LEIQDQAS------KIKDKHS 272

  Fly   226 YFKNFYPTLKKEAIEAINSDEYESSKDKAMDV----MSSLKITPKISEVESSSLV 276
                        |:..|.||:...| |.:||.    :|::.|...:.|:....||
 Worm   273 ------------ALIDILSDKKRFS-DYSMDFNVLSVSTMGIHQVLLEISFRRLV 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
r2d2	NP_001162903.1	DSRM	6..67	CDD:238007	16/60 (27%)
		DSRM	95..158	CDD:238007	15/88 (17%)
rde-4	NP_499265.1	DSRM	42..103	CDD:214634	16/61 (26%)
		DSRM	170..233	CDD:214634	14/65 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR46205
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.100