DRSC/TRiP Functional Genomics Resources

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Protein Alignment r2d2 and Stau2

DIOPT Version :10

Sequence 1:NP_609152.1 Gene:r2d2 / 34066 FlyBaseID:FBgn0031951 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_063143193.1 Gene:Stau2 / 171500 RGDID:621479 Length:598 Species:Rattus norvegicus


Alignment Length:191 Identity:47/191 - (24%)
Similarity:79/191 - (41%) Gaps:16/191 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NKSAVSALQEFCARTQINLPTYSFIPGEDG-----GYVCKVELLEIEALGNGRSKRDAKHLAASN 62
            |||.:|.:.|...:.  |:|....:..|.|     .:|.:|.:.|..|.|.|.||:.:|..||:.
  Rat   232 NKSEISLVFEIALKR--NMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATT 294

  Fly    63 ILRKIQLLPGIHGLMK--------DSTVGDLDEELTNLNRDMVKELRDYCVRREMPLPCIEVVQQ 119
            :|::::.||.:..:.|        ..|:.....|. ....:.:..|......|:...|...::.:
  Rat   295 VLQELKKLPPLPVIEKPKLFFKKRPKTIIKAGPEY-GQGMNPISRLAQIQQARKEKEPDYVLLSE 358

  Fly   120 SGTPSAPEFVACCSVASIVRYGKSDKKKDARQRAAIEMLALISSNSDNLRPDQMQVASTSK 180
            .|.|...|||....|.:.|..|....||.|::.||..||..:...:.....||:.....:|
  Rat   359 RGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDQLDKTGENK 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
r2d2NP_609152.1 DSRM 6..68 CDD:214634 18/66 (27%)
DSRM_SF 102..158 CDD:380679 15/55 (27%)
Stau2XP_063143193.1 None

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