DRSC/TRiP Functional Genomics Resources

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Protein Alignment r2d2 and loqs

DIOPT Version :10

Sequence 1:NP_609152.1 Gene:r2d2 / 34066 FlyBaseID:FBgn0031951 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_061519093.1 Gene:loqs / 1279194 VectorBaseID:AGAMI1_009981 Length:384 Species:Anopheles gambiae


Alignment Length:283 Identity:68/283 - (24%)
Similarity:121/283 - (42%) Gaps:53/283 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KSAVSALQEFCARTQINLPTYSFIPGE----DGGYVCKVELLEIEALGNGRSKRDAKHLAASNIL 64
            |:.:|.|||..:|..|. |.|..|..|    :..:..:|...:.:|:|.|:||::|||.||..::
Mosquito    63 KTPISVLQELLSRRGIT-PQYDLIQVEGAVHEPTFRYRVSYQDKDAMGTGKSKKEAKHAAAKALI 126

  Fly    65 RKIQ--------------LLPGIHGLMKDSTVGDLDEELTNLNRDMVKELRDYCVRREMPLPCIE 115
            .|:.              ..|.:..:..::.|...:|...|    .:..|::.|:.|.:|.|..|
Mosquito   127 DKLTGSIFLDHPAVYMNVHKPEVVNVHTNNNVNGEEEPTGN----PIGWLQEMCMARRLPPPTYE 187

  Fly   116 VVQQSGTPSAPEFVACCSVASIVRYGKSDKKKDARQRAAIEMLALISSNSDNLRPDQMQVASTSK 180
            ...:.|.|...:|...|.|.:....|:...||.|:::||..|...:....  |.|.|:       
Mosquito   188 TETEEGLPHERQFTIACVVLNYREVGEGKSKKIAKRQAAQRMWQRLQDQP--LEPSQI------- 243

  Fly   181 LKVVDMEESMEELEALRRKKFTTYWELKEAGSVDHTGMR-LC------DRHNYFKNFYPTLKKEA 238
            ::::| ||..|||      :.|.|     ||.  :.|:: :|      .:.:....|:..||..|
Mosquito   244 MQLLD-EEGNEEL------RQTGY-----AGR--YAGLKDVCIPTLTTSQSHKVSQFHKALKSRA 294

  Fly   239 IEAINSDEYESSKDKAMDVMSSL 261
            .:.:...:..|..|:::|.:..|
Mosquito   295 GKTLQQLQNLSLCDRSIDFIRLL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
r2d2NP_609152.1 DSRM 6..68 CDD:214634 22/65 (34%)
DSRM_SF 102..158 CDD:380679 16/55 (29%)
loqsXP_061519093.1 None

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