Protein Alignment Herp and herpud2

DIOPT Version :10

• Sequence 1: NP_609151.2
• Gene: Herp / 34065
• FlyBaseID: FBgn0031950
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: XP_021322315.1
• Gene: herpud2 / 393157
• ZFINID: ZDB-GENE-040426-868
• Length: 405
• Species: Danio rerio
• Alignment Length: 499
• Identity: 140/499 - (28%)
• Similarity: 210/499 - (42%)
• Gaps: 158/499 - (31%)

  Fly    22 QKNPETSVRLLIKSSNQQYEDLNVDSDLCWTVQRLKKHLSLIYPGKPLIQDQKLIYSGKLLDDSQ 86
            |...::.|.|:||:.||:|:|..::..|.|||::||||:|.:||.|||.:||:|:|||:||.|..
Zfish     3 QGTVDSPVTLVIKAPNQKYDDQTINCFLNWTVEKLKKHISNVYPSKPLSKDQRLVYSGRLLQDHL 67

  Fly    87 KISEVIRSYKDVYQQHHIFHLVCASKQVIRPAAKAPTVPQKD------------AVPAGP----- 134
            ::.:|:|.    ..::|:.||||||:       ..|:.|..|            :..|||
Zfish    68 QLRDVLRK----QDEYHMVHLVCASR-------SPPSSPTTDSHFSTTDSSSSTSDSAGPSLSST 121

  Fly   135 ---EVTGNANELRQRHAPHQQQAQQGNAGPHVTGDIGLANPWTHFWQQSQG------AAPAANAS 190
               |...|::.||.|..|         |..|     ||....|...|:.:|      ..|||...
Zfish   122 PSQEAQANSDGLRHRGNP---------AATH-----GLNPAPTGVMQRPEGMPLPMQGGPAAGFP 172

  Fly   191 ASPHALFQQQALIYNAWMQQAYAQ--YMQQLTLRSTLPGSNQSGLP-----PPTQPLLPSVPLIA 248
            ..|..:..|.     .|.||.||:  |:|.....:....|:.:..|     |.|||:.|:.|
Zfish   173 THPMYMPMQM-----FWWQQMYARHYYVQYQAAIAASRASSVAPSPSLSAGPATQPVQPNEP--- 229

  Fly   249 GRNFGEVQQVAGAAAAPAAQVPADPQINGAPQNRNF-PNIQ---------EEPEMH-DWLDSFFS 302
                          |||...       |.||::|.. ||||         .:.|:: ||||..::
Zfish   230 --------------AAPMGP-------NPAPEDRPANPNIQMNAQGGAMLNDDELNRDWLDWMYT 273

  Fly   303 FTRLAIFVTVLYFNSSALR-------CLLVVLIAGAIYLYH-IGVLRRRRERNNNNINRNNNAGD 359
            .:|.||.::::||.||..|       .|||.|::..:|..| .|....|.|.      :|..|.:
Zfish   274 VSRAAILLSIVYFYSSFGRFVMVIGAMLLVYLLSMFMYSRHQAGWFPFRAEL------QNPRAEE 332

  Fly   360 AAAFAA-----VQQIQRMMDAAVQRENNDPQAANEPGAVPAAGPAAAGEQDAIDAPPAGAPVAPA 419
            .|...|     :|:::||||..::.:..|                 :||:         .|..|.
Zfish   333 GAQDEADQNQDMQEMERMMDEGIEDDEGD-----------------SGEE---------GPDDPM 371

  Fly   420 SAANPEPTDVSAEAVEPPNANNSVISVVRTFVITFFTSLLPEAP 463
            :|...:|               ..:|...:|:.||||||:||.|
Zfish   372 NAGPHQP---------------GFLSATWSFISTFFTSLIPEGP 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Herp	NP_609151.2	Ubl_HERP	29..108	CDD:340488	35/78 (45%)
herpud2	XP_021322315.1	Ubl_HERP2	9..85	CDD:340639	35/79 (44%)