DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7149 and Chpt1

DIOPT Version :9

Sequence 1:NP_001285718.1 Gene:CG7149 / 34063 FlyBaseID:FBgn0031948 Length:415 Species:Drosophila melanogaster
Sequence 2:XP_006241292.1 Gene:Chpt1 / 362866 RGDID:1359283 Length:468 Species:Rattus norvegicus


Alignment Length:399 Identity:106/399 - (26%)
Similarity:182/399 - (45%) Gaps:55/399 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSEAHLRGFERYKYSSIDTSFLSVYVMHPFWNYCVKFVPKWLAPNVLTFVGFLMTVVNFILIAYY 71
            ||.|.||..|.::||:...|.... .:..||.:.::::|.|:|||.:|..|..:.:...:::.:|
  Rat    21 LSAAQLRRLEDHRYSAAGESLFEP-PLQLFWTWLLQWIPLWIAPNTITLFGLAINLFTTLVLIFY 84

  Fly    72 DWGFEAANSETGNTVPAWVWTVAAINILIYYNLDGMDGKQARRTGTSGPLGELFDHGLDSYSAAL 136
               ......|    .|.|.:.:.|:.:.||.:||.:||||||||.:..|||||||||.||.|...
  Rat    85 ---CPTVTEE----APYWTYLLCALGLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLSTVF 142

  Fly   137 IPI--YLFSLFGTHDLPPIRMFFVIWNVFLNFYLTHVEKYNTGVMFLPWG-YDFTMWGVS-GMLF 197
            :.|  .:....|||   |..:||..:.....||..|.:.|.:||  |.:| .|.|...|: .::|
  Rat   143 MAIGASIAVRLGTH---PDWLFFCSFVGMFMFYCAHWQTYVSGV--LRFGRVDVTEIQVALVIVF 202

  Fly   198 VATVFGPEM---YRFSIYGFTMANMFEFVLIGSGMVSS-----HPIIARNIYLSYKNKTGKMRPM 254
            :.:.||..|   |...|....:..:....::| |::.|     |.|:...:     .|.|.....
  Rat   203 LLSTFGGAMMWDYTIPILEIKLKILPVLGVVG-GLIFSCSNYFHVILHGGV-----GKNGSTIAG 261

  Fly   255 WEMLRPFFAFVWLFVITVVWSFFSRNDVINKEPRILWILYGTIFSNIACRLIVAQMSDTRCDAF- 318
            ..:|.|......:.::.::....|..:|..|.|.:..:::|.:|:.:|.:|::|.|  |:.:.: 
  Rat   262 TSVLSPGLHIGLIIILAIMIYKKSATNVFEKHPCLYTLMFGCVFAKVAQKLVIAHM--TKSELYL 324

  Fly   319 --NVLMWPLAATVGVCCFPYYQQVFDSDLTSDTERWILYGLTIFSTLAHWHYGYGVVSEMC---- 377
              .|.:.|     |:.   :..|.|::.:......||...:|.|..:.::       |.:|    
  Rat   325 QDTVFIGP-----GLL---FLDQYFNNFIDEYVVLWIAMVITSFDMMIYF-------SSLCLQIS 374

  Fly   378 DHFHIRCFK 386
            .|.|:..||
  Rat   375 RHLHLSIFK 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7149NP_001285718.1 CDP-OH_P_transf 4..389 CDD:294308 106/399 (27%)
Chpt1XP_006241292.1 CDP-OH_P_transf 25..337 CDD:294308 91/340 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D847100at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.