DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7149 and Selenoi

DIOPT Version :10

Sequence 1:NP_609149.3 Gene:CG7149 / 34063 FlyBaseID:FBgn0031948 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001128226.2 Gene:Selenoi / 362713 RGDID:1560938 Length:398 Species:Rattus norvegicus


Alignment Length:396 Identity:172/396 - (43%)
Similarity:237/396 - (59%) Gaps:14/396 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCMRYLSEAHLRGFERYKYSSIDTSFLSVYVMHPFWNYCVKFVPKWLAPNVLTFVGFLMTVVNF 65
            |....|:|...|.||::||||::||:.||:||||||||..||..|.|||||::||.||::.|.||
  Rat     1 MAGYEYVSPEQLAGFDKYKYSALDTNPLSLYVMHPFWNTIVKVFPTWLAPNLITFSGFMLLVFNF 65

  Fly    66 ILIAYYDWGFEAANSETGNT-VPAWVWTVAAINILIYYNLDGMDGKQARRTGTSGPLGELFDHGL 129
            :|:.|:|..|.|  |..|:. ||.|||.|..|...:.|.|||:||||||||.:|.||||||||||
  Rat    66 LLLTYFDPDFYA--SAPGHKHVPDWVWIVVGILNFVAYTLDGVDGKQARRTNSSTPLGELFDHGL 128

  Fly   130 DSYSAALIPIYLFSLF--GTHDLPPIRMFFVIWNVFLNFYLTHVEKYNTGVMFLPWGYDFTMWGV 192
            ||::.....:.::|:|  |...:....::.::|.|..:|.|:|.|||||||:|||||||.:...:
  Rat   129 DSWACVYFVVTVYSIFGRGPTGVSVFVLYLLLWVVLFSFILSHWEKYNTGVLFLPWGYDISQVTI 193

  Fly   193 SGMLFVATVFGPE-MYRFSIYGFTMANMFEFVLIGSGMVSSHPIIARNIYLSYKNKTGKMRPMWE 256
            |.:..|..|.|.| .|...::.|...::|..::||..:..:.|:...|.|.|||:.:.|...::|
  Rat   194 SFVYIVTAVVGVEAWYEPFLFNFLYRDLFTAMIIGCALCVTLPMSLLNFYRSYKSNSLKHNSIYE 258

  Fly   257 MLRPFFAFVWLFVITVVWSFFSRNDVINKEPRILWILYGTIFSNIACRLIVAQMSDTRCDAFNVL 321
            .:.|||:...||.::.||...|.:|::...|||.:.:.||.|:||.|:|||.|||.|||...|.|
  Rat   259 AMVPFFSPCLLFTLSTVWILRSPSDILEMHPRIFYFMVGTAFANITCQLIVCQMSSTRCPTLNWL 323

  Fly   322 MWPLAATVGVCCFPYYQQVFDSDLTSDTERWILYGLTIFSTLAHWHYGYGVVSEMCDHFHIRCFK 386
            :.||...|..        |.....||..|..:||.||...||||.|||..||.::..||.|..|.
  Rat   324 LLPLFLVVAT--------VIVGTTTSRLESVLLYTLTAAFTLAHIHYGVQVVKQLSRHFQIYPFS 380

  Fly   387 VRKSSS 392
            :||.:|
  Rat   381 LRKPNS 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7149NP_609149.3 PRK10832 4..389 CDD:469774 168/388 (43%)
SelenoiNP_001128226.2 PRK10832 6..>312 CDD:469774 136/307 (44%)

Return to query results.
Submit another query.