DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Brd7-9 and AT5G55040

DIOPT Version :10

Sequence 1:NP_609148.1 Gene:Brd7-9 / 34062 FlyBaseID:FBgn0031947 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_200315.2 Gene:AT5G55040 / 835595 AraportID:AT5G55040 Length:916 Species:Arabidopsis thaliana


Alignment Length:614 Identity:109/614 - (17%)
Similarity:188/614 - (30%) Gaps:227/614 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKNKSERREKY----------EEYSQHQDPAQLQRGLKLILKVGSNATPEYSANSPMVDGGPPTA 62
            ::.:.:|..:|          ||..:.::..:.|:.||.:||:          |.......||..
plant    35 RRGQRQRNVRYNFDFDDYFDEEEEDEVEEEKKRQKKLKQVLKL----------NQSRARADPPVK 89

  Fly    63 AEAMMSPV----PEELQDHQGHRERHKKSKKKKKKKDREKKHKHHKEKRHRSRDRHRDAGSDEDM 123
            :.|.:...    .|:.:|.:...|..:.|:|::.||   :|.....|:.....::..|...:|:.
plant    90 SRARVRHASDYEEEDEEDDEAEEEEEEVSEKRQVKK---RKLNRQDEEEEEEEEKDYDVEEEEEE 151

  Fly   124 MAGADDAACSGFAPSSVAPPAADPDSSQDGFSFMDDDQSQPLPENILFFAGITTDNSPSNCPVTK 188
            ..|..|                         |..:||:.:.           ....|.:.|.   
plant   152 EEGHAD-------------------------SEEEDDKERK-----------RRSASGNQCD--- 177

  Fly   189 PIAPRKLDDILMGSSPNSSSLQSSSLGLIGSSPTKPLPDLLIPSPSTPGGANSLNALTPKALEAP 253
                                         .||.|.|:.|                          
plant   178 -----------------------------HSSETTPILD-------------------------- 187

  Fly   254 KTPSSSSESGREPRSCVLKLKQQKSPLNKLLEHLLRFLEKRDPHQFFAWPVTDDMAPGYSSIISR 318
                                       .|.||.:|..|:|:|.:..:|.||..:..|.|..:|..
plant   188 ---------------------------KKSLELILDKLQKKDIYGVYAEPVDPEELPDYHDMIEH 225

  Fly   319 PMDFSTMRQKIDDHEYTALTEFTDDFKLMCENAIKYNHVDTVYNKAAKRLLQVGMKHLQPENLM- 382
            ||||||:|:|:.:..|:.|.|...|..|:|.||::||..||||.|.|:.:.::|.:..:...|. 
plant   226 PMDFSTVRKKLANGSYSTLEELESDVLLICSNAMQYNSSDTVYYKQARTIQEMGKRKFEKARLKI 290

  Fly   383 ----------RSLKPLSGYMRELTARELGFELSSNDMSRENNDSADEGASTGAEEPRTPAQLEEE 437
                      ..:||.|...:::          ....||...::.....|:||            
plant   291 KRAEKELKTDEKVKPDSSVKKQV----------RQPFSRNGLEAVGSDFSSGA------------ 333

  Fly   438 ERKRTLRLENAPKTHFEPYVDDLTGEEILAQVQNAAQQAKQRVNAKKNAHKMGFLRQMKDGTTTL 502
                  .|.:...:..||....:.|.|                       |..:...:.:|.|:|
plant   334 ------NLASGGASQNEPVSTQIGGHE-----------------------KHSYTDVLFEGNTSL 369

  Fly   503 NLVIKEENEGPERVVTIGDLVGKLQKGSAQLQTRQVDKRNAVRTVKSLNYGAFASFAPTFDSRFS 567
                   .:..|:...:....|...|...:|...:.|:|        ..|..........:|.|:
plant   370 -------VDSLEKAEDLSSGKGLFGKCGRKLSVVEEDRR--------ATYEDSDQQGDRSESIFT 419

  Fly   568 TLSAEETQLVLRTYGDASSAEYAESILQF 596
            |..:|..|.|  ..|..:...|..|:.:|
plant   420 TFESEIKQFV--AVGLHAEHAYGRSLARF 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brd7-9NP_609148.1 Bromo_brd7_like 279..376 CDD:99945 38/96 (40%)
DUF3512 452..632 CDD:463436 25/145 (17%)
AT5G55040NP_200315.2 Bromodomain 187..283 CDD:99922 39/148 (26%)

Return to query results.
Submit another query.