DRSC/TRiP Functional Genomics Resources

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Protein Alignment VSIG1 and vsig1

DIOPT Version :9

Sequence 1:XP_005262184.1 Gene:VSIG1 / 340547 HGNCID:28675 Length:449 Species:Homo sapiens
Sequence 2:XP_031762727.1 Gene:vsig1 / 100127183 XenbaseID:XB-GENE-484207 Length:356 Species:Xenopus tropicalis


Alignment Length:387 Identity:146/387 - (37%)
Similarity:205/387 - (52%) Gaps:61/387 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     9 FLILSCLAGQVSV----VQVTIPDGFVNVTVGSNVTLICIYT-TTVASREQLSIQWSFFHKKEME 68
            ||:...|...::.    ||||:...:||||.|.|.||.|.|. ....|.:.|.|||:.|..|...
 Frog     3 FLLFVALGLSLTALSHCVQVTVRSPYVNVTSGQNATLYCTYALNNPQSTKNLVIQWNVFQAKSQN 67

Human    69 PISHSSCLSTEGMEEKAVSQCLKMTHARDARGRCSWTSESPWEEGKWPDVEAVKGTLDGQQAELQ 133
            ..:.|.|.|.   :|.:::||||..:.|||||||:|.:                          |
 Frog    68 QETLSPCFSP---DEGSLNQCLKTAYGRDARGRCNWKN--------------------------Q 103

Human   134 IYFSQGGQAVAIGQFKDRITGSNDPGNASITISHMQPADSGIYICDVNNPPDFLGQNQGILNVSV 198
            ::|.|.||..:...:|:|:|.:..||||:||||:|||.|:|:|.|::.|.|:..|  :|.:.|:|
 Frog   104 VFFYQNGQPFSGPGYKNRVTAALTPGNATITISNMQPEDTGVYTCEILNLPESSG--EGKIIVTV 166

Human   199 LVKPSKPLCSVQGRPETGHTISLSCLSALGTPSPVYYWHKLEGRDIVPVKENFNPTTGILVIGNL 263
            ||.||.|.|:::|..||||.|||.|.|..|.|.|:|.|:::|...:.......|...|.|:||||
 Frog   167 LVPPSNPHCTIRGAVETGHFISLMCYSEEGMPRPLYTWNRVENGVLKSTPPQMNQQKGSLIIGNL 231

Human   264 TNFEQGYYQCTAINRLGNSSCEIDLTSSHPEVGIIVGALIGSLVGAAIIISVVCFARNKAKAKAK 328
            |:||:|||:|||.|.|||::||::|.:. .|.|:|..|:||.|:.|||||::|.|...|.|.|  
 Frog   232 TDFEEGYYRCTASNALGNATCELNLHTG-GEAGVIAAAVIGGLLAAAIIIAIVWFLIVKRKQK-- 293

Human   329 ERNSKTIAELEPMTKINPRGESEAMPREDATQLEVTLPSSIHETGPDTIQEPDYEPKPTQEP 390
                |.|...:.| |.:|.||:.          |.|..|.       ...||:.|...:.||
 Frog   294 ----KQIPPTKEM-KTSPSGETH----------EYTAVSG-------EANEPNKETLGSSEP 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VSIG1XP_005262184.1 Ig 97..189 CDD:299845 32/91 (35%)
IG_like 127..198 CDD:214653 28/70 (40%)
IG_like 216..289 CDD:214653 35/72 (49%)
Ig 219..286 CDD:143165 32/66 (48%)
vsig1XP_031762727.1 V-set 26..167 CDD:400157 61/171 (36%)
Ig strand C' 110..115 CDD:409353 2/4 (50%)
FR3 118..150 CDD:409353 18/31 (58%)
Ig strand D 121..127 CDD:409353 2/5 (40%)
Ig strand E 130..137 CDD:409353 5/6 (83%)
Ig strand F 144..151 CDD:409353 3/6 (50%)
CDR3 152..157 CDD:409353 2/4 (50%)
FR4 158..166 CDD:409353 3/9 (33%)
Ig strand G 158..166 CDD:409353 3/9 (33%)
Ig <195..251 CDD:416386 26/55 (47%)
Ig strand C 201..205 CDD:409353 1/3 (33%)
Ig strand E 224..228 CDD:409353 2/3 (67%)
Ig strand F 238..243 CDD:409353 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I34437
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H12703
Inparanoid 1 1.050 200 1.000 Inparanoid score I12019
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221829at32523
OrthoFinder 1 1.000 - - FOG0013483
OrthoInspector 1 1.000 - - oto148277
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R18397
SonicParanoid 1 1.000 - - X11000
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.090

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