DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and slc6a3

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_571830.1 Gene:slc6a3 / 80787 ZFINID:ZDB-GENE-010316-1 Length:629 Species:Danio rerio


Alignment Length:642 Identity:163/642 - (25%)
Similarity:270/642 - (42%) Gaps:111/642 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GGSLALAARRI--------RSRQVHSMAVRTGSAYD-TLERPYRHDKCRGR--WAKSADFYFASC 98
            |.|.|...|.:        ...|..|.::|...|:. |....:.|...:.|  |.|..||..:..
Zfish    26 GSSSAAGPREVELVLVKEQNGVQFTSSSLRNPGAHSHTHTHTHTHPSGQQRETWGKKIDFLLSVI 90

  Fly    99 THA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTIS 155
            ..|        |..|.:.        :||. .|::.||:.|:...:|:|.::..|||::..|...
Zfish    91 GFAVDLANVWRFPYLCYK--------NGGG-AFLVPYLLFMVIAGMPLFYMELALGQYNREGAAG 146

  Fly   156 AFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENY 220
            .:::.|||||:|:.::|::|...:||::.....|.|..:|....:||:.|||:||:..|| ..|.
Zfish   147 VWKICPIFKGVGFTVILISLYVGSYYNVIIAWALFYLFSSFSGELPWIHCNNTWNSPNCS-DPNA 210

  Fly   221 DV--DDYRVDPHSTVEFFRSMIASTAKGSTSMSIS---WSMLIGVLSIWLVVLAL-LLKPVAFIG 279
            .:  |.|:..|  .:|:|...:....:.|....:.   | .|...|::.:|||.. |.|.|...|
Zfish   211 TLLNDTYKTTP--ALEYFERGVLHVHESSGIDDLGAPRW-QLTACLAVVIVVLYFSLWKGVKTSG 272

  Fly   280 KVLRCSCVLMFGFFVAVFLYLLIHEQVT----FDTLH-YYWMPQLDSFDS-ILATARTALLMAGG 338
            ||:..:..:.:     |.|.:|:...||    .|.:. |..:..|..:|: :...|.|.:..   
Zfish   273 KVVWITATMPY-----VVLTVLLLRGVTLPGAIDGIKAYLSVDFLRLYDAQVWIEAATQICF--- 329

  Fly   339 ALGPGWGSIITLSSYNNFRRDAERLSIWVCLTHITIGLMGLLCCNVAHDHFEDHVGMMPL-HVDE 402
            :||.|:|.:|..||||.|..:..|.:|      ||..:      |.....|...|....| ::.:
Zfish   330 SLGVGFGVLIAFSSYNKFSNNCYRDAI------ITSSI------NSLTSFFSGFVIFSFLGYMSQ 382

  Fly   403 KHHMQF-------LYLCFSYLFGRFTTTP--NLWAFLFFGMIFLSELCALIIQMMSVITALFDEF 458
            ||::..       ..|.|........|.|  ::||.:||.|:....:.:.:..|.||||.|.|||
Zfish   383 KHNVALDKVATDGPGLVFIIYPEAIATLPGSSVWAVIFFIMLLTLGIDSAMGGMESVITGLIDEF 447

  Fly   459 ETLRSRR-----ILVISSL---VFCLTASSVYFCTQLGFSQLTQLPNLAVFTHLLISGILV--LM 513
            :.|...|     .:|:|:.   :.|:|...:|.        .|.|.:.|..|.:|. |:|:  :.
Zfish   448 KFLHKHRELFTLFIVVSTFLISLICVTNGGIYV--------FTLLDHFAAGTSILF-GVLIEAIG 503

  Fly   514 TTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGLCLFQLTYLFTRDRIHDVLIY----- 573
            ..|.||..||..|::.|:|:....:.....:|.:|.||   ||.:...|..........|     
Zfish   504 IAWFYGVDRFSDDIEEMIGQRPGLYWRLCWKFVSPCFL---LFMVVVSFATFNPPKYGSYYFPTW 565

  Fly   574 -------VSQGLILLTAISYMVYKVCRTNGDWRQRLQQCLAPH-DWHPVD-ADNRRF 621
                   :|...:::..: |..||.|...|.:..:|...:.|. |.|.|: .:.|:|
Zfish   566 ATMVGWCLSISSMIMVPL-YAFYKFCSLPGSFCDKLAYAITPETDHHLVERGEVRQF 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 138/531 (26%)
slc6a3NP_571830.1 SLC6sbd_DAT1 76..623 CDD:212083 153/592 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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