DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and slc6a17

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001243653.1 Gene:slc6a17 / 798635 ZFINID:ZDB-GENE-030131-8187 Length:730 Species:Danio rerio


Alignment Length:663 Identity:149/663 - (22%)
Similarity:251/663 - (37%) Gaps:163/663 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EPVETESGGGMGGSLALAARRIRSRQVHSMAVRTGSAYDTLERPYRHDKCRGRWAKSADFYFASC 98
            ||| |||   :...|||.|.........||.:..|||....:.....|...||.|.::...:...
Zfish    15 EPV-TES---VADLLALEAPMDYKSSQMSMNMTGGSAPPIGKPDISPDLEDGRPAWNSKLQYILA 75

  Fly    99 THAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAFR-V 159
            ...| |:....:..|..|   :||. .:::.|.:.::...:|:|.::..:||....|:|..:. |
Zfish    76 QVGF-SVGLGNVWRFPYLCQKNGGG-AYLVPYFILLILIGIPLFFLELAVGQRIRRGSIGVWNYV 138

  Fly   160 APIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENYDVDD 224
            .|...|||.:.|::......||::.....:.|...|....:||..|....|..:..         
Zfish   139 CPRLGGIGASSLMVCGFVGLYYNVIIGWSIFYFFQSFQYPLPWSDCPIRKNGSQAI--------- 194

  Fly   225 YRVDPH------STVEFFRSMIASTAKGSTSMSISWSMLIGVLSIWLVVLALLLKPVAFIGKVLR 283
              |:|.      :|..::|..:..|:..:.|..::|.|.:.:|:.|::|...::|.:...|||:.
Zfish   195 --VEPECEKSSATTYFWYRETLNITSTIADSGGLNWRMTLSLLAAWIIVCLAVIKGIQSSGKVMY 257

  Fly   284 CSC----VLMFGFFV-AVFLYLLIHEQVTFDTLHYYWMPQLDSF--DSILATARTALLMAGGALG 341
            .|.    |::|.|.| .:||      :...|.:.:.:.|:|:..  ..:...|.|.:..   |||
Zfish   258 FSSLFPYVVLFCFLVRGLFL------KGAVDGIAHMFTPKLEIMLEPQVWREAATQVFF---ALG 313

  Fly   342 PGWGSIITLSSY----NNFRRDAERLSIWVCLTHI--------TIG-----------------LM 377
            .|:|.:|..|||    ||...||..:|:...||.|        .:|                 ::
Zfish   314 LGFGGVIAFSSYNKRDNNCHFDAVLVSVINFLTSILATLVVFAVLGFKANIMNEKCVVENAEKIL 378

  Fly   378 GLLCCNV-AHDHFEDHVGMMPLHVDEKHHMQ---------------------------------F 408
            |.|..|| :||....||....|...:...|.                                 .
Zfish   379 GYLNSNVLSHDLIPPHVNFSHLTTSDYAEMYGVIKIVKEDSFAQLGLEQCLLEDELNKAVQGTGL 443

  Fly   409 LYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFETLRSRRILV----- 468
            .::.|:.....|..:| .|:.:||.|:....|.::|..|..:.|.:.|.|: :|...:.|     
Zfish   444 AFIAFTEAMTHFPASP-FWSVMFFFMLINLGLGSMIGTMTGITTPILDTFK-IRKEYLTVGCCIV 506

  Fly   469 --ISSLVFCLTASSVYFCTQ-------LGFSQLTQLPNLAVFTHLLISGILVLMTTWVYGRVRFQ 524
              :..|:| :..|..||.|.       |..:.:..|.|::|              .|:||..||.
Zfish   507 AFLCGLLF-VQRSGNYFVTMFDDYSAGLPLTIVVILENVSV--------------AWIYGTKRFM 556

  Fly   525 CDLQFMLGKTISSFKIFFIRFATPIFLGLCLFQLTYLFTRDRIHDVLIYVSQGLILLTAISYMVY 589
            .||:.|||....|...:..::.:|:    ||               :|.:|..::.: |||.:.|
Zfish   557 QDLEDMLGFRPYSVYFYLWKYVSPV----CL---------------IILISASVVEM-AISPLGY 601

  Fly   590 KVCRTNGDWRQRL 602
            ..      |.|.|
Zfish   602 NA------WVQDL 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 124/571 (22%)
slc6a17NP_001243653.1 SLC5-6-like_sbd 63..651 CDD:294310 132/611 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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