DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and slc6a4a

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:679 Identity:178/679 - (26%)
Similarity:270/679 - (39%) Gaps:162/679 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ENSEHGTELPGDFIGEPVETESGGGMGGSLALAARRIRSRQVHSMAVRTGSAYDTLERP--YRH- 80
            |:.|:| .|..|.:.|. :.:||.|.|    ..:...||....|.....|:..|.:..|  :|. 
Zfish    22 ESQENG-RLVVDSVPEK-DQKSGSGPG----QVSNGYRSTSPQSPKEGAGTGTDRVNTPGTFRTL 80

  Fly    81 -------DKCRGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMG 130
                   |..|..|:|..||..:...:|        |..:.:.        :||. .|::.||:.
Zfish    81 VVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQ--------NGGG-AFLLPYLLM 136

  Fly   131 MLFYSLPIFLIQAFLGQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVN 194
            .:|..:|:|.::..||||..||.||.:: |.|||||||:||.::.|....||:......|.|.::
Zfish   137 AVFGGVPLFYMELALGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLS 201

  Fly   195 SIHPVIPWMSCNNSWNTQECSLHENYDVD----DYRVDPHSTVEFFRSMIAST--AKGSTSMS-I 252
            |....:||.:|||.|||..|:.:.:.|::    :..:.|  ..||:...:...  :.|...:. :
Zfish   202 SFRATLPWTTCNNRWNTPNCTHYLSTDLNVSWTNNSISP--AEEFYVRQVLQVHLSPGLHQLGWV 264

  Fly   253 SWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQV---TFDTLHYY 314
            ||.:.:.:|.|:.||...:.|.|...|||:..:..    |...|.|.|||....   .:..:.:|
Zfish   265 SWQLALCLLFIFTVVYFSIWKGVKTSGKVVWVTAT----FPYLVLLILLIRGATLPGAWRGVVFY 325

  Fly   315 WMPQLDSFDSILATARTALLMAGG----ALGPGWGSIITLSSYNNFR----RDAERLSIWVCLTH 371
            ..|   .:..:|.|  |..|.|..    :||||:|.::..:|||.|.    :||...|...|||.
Zfish   326 LKP---DWKKLLTT--TVWLDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTS 385

  Fly   372 ITIG-----LMGLLC-------CNVAHDH--------FEDHVGMMPLHVDEKHHMQFLYLCFSYL 416
            ...|     ::|.:.       ..||.|.        :.:.:..||                   
Zfish   386 FLSGFVIFTVLGYMAEMRQQGVETVAKDAGPSLLFIIYAEAIANMP------------------- 431

  Fly   417 FGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFETL--RSRRILVISSLVFC-LTA 478
                  ....:|.:||.||.:..|.:....:..||||:.|||..|  |.|...|:..:..| |.|
Zfish   432 ------AATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGLVCVCYLGA 490

  Fly   479 SSVY-----FCTQLGFSQLTQLPNLAVFTHLLISGILVLMTTWVYGRVRFQCDLQFMLGKTISSF 538
            .|..     |..:| |.:....|  ||.|.:.:.   |:..:|.||..||..|:|.|||      
Zfish   491 LSTLTYGGAFVVKL-FEEYATGP--AVITVVFLE---VIAVSWFYGTTRFCNDVQLMLG------ 543

  Fly   539 KIFFIRFATPIFLGLC------------------------LFQLTYLFTRDRIHDVLIYVSQGLI 579
                  ||..:|..:|                        ||...|.|..    .||.|......
Zfish   544 ------FAPGLFWRVCWIAICPCFLLFIIVSFLAFPPEVKLFDYLYPFWT----TVLGYCIGVSS 598

  Fly   580 LLTAISYMVYKVCRTNGDWRQRLQQCLAP 608
            .:...|||||.:..|.|.::|||.:.:.|
Zfish   599 FICVPSYMVYHLVTTKGTFQQRLLKGITP 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 151/557 (27%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:294310 160/604 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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