DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and SLC6A2

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001165975.1 Gene:SLC6A2 / 6530 HGNCID:11048 Length:628 Species:Homo sapiens


Alignment Length:646 Identity:166/646 - (25%)
Similarity:276/646 - (42%) Gaps:106/646 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VETESGGG-MGGSLALAARRIRSRQVHSMAVRTGSAYDTLERPYRHD-KCRGRWAKSADFYFASC 98
            |:.|:.|. .|....|.||    :....:.|:..:....|..|...| :.|..|.|..||..:..
Human    10 VQPENNGADTGPEQPLRAR----KTAELLVVKERNGVQCLLAPRDGDAQPRETWGKKIDFLLSVV 70

  Fly    99 THAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAFRVA 160
            ..|..   .:.:..|..|   :||. .|:|.|.:.::...:|:|.::..|||::..|..:.:::.
Human    71 GFAVD---LANVWRFPYLCYKNGGG-AFLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWKIC 131

  Fly   161 PIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNTQECS---------- 215
            |.|||:|||::|:.|....||::.....|.|..:|....:||..|.::||:..|:          
Human   132 PFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFSSFTLNLPWTDCGHTWNSPNCTDPKLLNGSVL 196

  Fly   216 -LHENYDVDDYRVDPHSTVEFFRSMIASTAKGSTSMSI---SWSMLIGVLSIWLVVLALLLKPVA 276
             .|..|  ..|:..|  ..||:...:....:.|....|   .|.:|:.::.:.:|:...|.|.|.
Human   197 GNHTKY--SKYKFTP--AAEFYERGVLHLHESSGIHDIGLPQWQLLLCLMVVVIVLYFSLWKGVK 257

  Fly   277 FIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTFD--------TLH--YYWMPQLDSFDSILATART 331
            ..|||:..:..|  .:||   |::|:...||..        .||  :|.:.:.    ::...|.|
Human   258 TSGKVVWITATL--PYFV---LFVLLVHGVTLPGASNGINAYLHIDFYRLKEA----TVWIDAAT 313

  Fly   332 ALLMAGGALGPGWGSIITLSSYNNF----RRDAERLSIWVCLTHITIG-----LMGLLCCNVAHD 387
            .:..   :||.|:|.:|..:|||.|    .|||...|...|:|....|     ::|.:    ||:
Human   314 QIFF---SLGAGFGVLIAFASYNKFDNNCYRDALLTSSINCITSFVSGFAIFSILGYM----AHE 371

  Fly   388 H---FED----HVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALII 445
            |   .||    ..|::.:...|         ..|.|.|     ...||.:||.|:....|.:.:.
Human   372 HKVNIEDVATEGAGLVFILYPE---------AISTLSG-----STFWAVVFFVMLLALGLDSSMG 422

  Fly   446 QMMSVITALFDEFETLRSRRILVISSLVFCLTASSVYFCTQLGFSQLTQLPNLAVFTHLLISGIL 510
            .|.:|||.|.|:|:.|:..|.|....:.|.....:::..|:.|...||.|...|..|.:|.:   
Human   423 GMEAVITGLADDFQVLKRHRKLFTFGVTFSTFLLALFCITKGGIYVLTLLDTFAAGTSILFA--- 484

  Fly   511 VLM----TTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGLCLFQLTYLFTRDRIHDVL 571
            |||    .:|.||..||..|:|.|:|.....:.....:|.:|.|| |.:..::.:..:...:|..
Human   485 VLMEAIGVSWFYGVDRFSNDIQQMMGFRPGLYWRLCWKFVSPAFL-LFVVVVSIINFKPLTYDDY 548

  Fly   572 IY------VSQGLILLTAI---SYMVYKVCRTNGDWRQRLQQCLAPHDWHPVDA--DNRRF 621
            |:      |..|:.|.:.:   .|::||...|.|...:||...:.|.:.|.:.|  |.|:|
Human   549 IFPPWANWVGWGIALSSMVLVPIYVIYKFLSTQGSLWERLAYGITPENEHHLVAQRDIRQF 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 140/539 (26%)
SLC6A2NP_001165975.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/12 (33%)
SLC6sbd_NET 56..612 CDD:212081 155/596 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.