DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and Slc6a17

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:640 Identity:141/640 - (22%)
Similarity:239/640 - (37%) Gaps:168/640 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NSEHGTELPGDFIG--EPVETES-----GGGMGGSLALAARRIRSRQVHSMAVRTGSAYDTLERP 77
            ::||.||...|.:.  |||:.:.     .|..||...:|...:                |..:||
  Rat    13 SNEHVTESVADLLALEEPVDYKQSVLNVAGETGGKQKVAEEEL----------------DAEDRP 61

  Fly    78 YRHDKCRGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSLPIF 139
                    .|.....:..|....   |:....:..|..|   :||. .:::.||:.::...:|:|
  Rat    62 --------AWNSKLQYILAQIGF---SVGLGNIWRFPYLCQKNGGG-AYLVPYLVLLIIIGIPLF 114

  Fly   140 LIQAFLGQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWM 203
            .::..:||....|:|..:. |.|...|||::..::.|....||::.....:.|...|....:|| 
  Rat   115 FLELAVGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPW- 178

  Fly   204 SCNNSWNTQECSLHENYDVDDYRVDPH------STVEFFRSMIASTAKGSTSMSISWSMLIGVLS 262
                    .||.:..|..|  ..|:|.      :|..::|..:..:...|.|..::|.|.:.:|.
  Rat   179 --------SECPVIRNGTV--AVVEPECEKSSATTYFWYREALDISNSISESGGLNWKMTVCLLV 233

  Fly   263 IWLVVLALLLKPVAFIGKVLRCSCVLMFGFFV-AVFLY--LLIHEQVTFDTLHYYWMPQLDSF-- 322
            .|.:|...::|.:...|||:..|.  :|.:.| |.||.  ||:...|  |.:.:.:.|:||..  
  Rat   234 AWSIVGMAVVKGIQSSGKVMYFSS--LFPYVVLACFLVRGLLLRGAV--DGILHMFTPKLDKMLD 294

  Fly   323 DSILATARTALLMAGGALGPGWGSIITLSSY----NNFRRDAERLSI-----WVCLTHITIGLMG 378
            ..:...|.|.:..   |||.|:|.:|..|||    ||...||..:|.     .|..|.:...::|
  Rat   295 PQVWREAATQVFF---ALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFFTSVLATLVVFAVLG 356

  Fly   379 LLCCNVAH-----DHFEDHVG----------MMPLHVDEKH-----------------HMQF--- 408
            .. .|:.:     ::.|..:|          ::|.||:..|                 ..||   
  Rat   357 FK-ANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLTTKDYSEMYNVIMTVKEKQFSAL 420

  Fly   409 --------------------LYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITA 453
                                .::.|:.....|..:| .|:.:||.|:....|.::|..|..:.|.
  Rat   421 GLDPCLLEDELDKSVQGTGLAFIAFTEAMTHFPASP-FWSVMFFLMLINLGLGSMIGTMAGITTP 484

  Fly   454 LFDEFETLRSRRILVISSLVFC-------LTASSVYFCTQ-------LGFSQLTQLPNLAVFTHL 504
            :.|.|:.  .:.:..:...||.       :..|..||.|.       |..:.:..|.|:||    
  Rat   485 IIDTFKV--PKEMFTVGCCVFAFFVGLLFVQRSGNYFVTMFDDYSATLPLTVIVILENIAV---- 543

  Fly   505 LISGILVLMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGLCLFQLT 559
                      .|:||..:|..:|..|||.....|..:..:|.:|    ||:..||
  Rat   544 ----------AWIYGTKKFMQELTEMLGFRPYRFYFYMWKFVSP----LCMAVLT 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 119/527 (23%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 128/577 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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