DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and slc6a6b

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001032750.1 Gene:slc6a6b / 569098 ZFINID:ZDB-GENE-030131-3077 Length:625 Species:Danio rerio


Alignment Length:603 Identity:148/603 - (24%)
Similarity:244/603 - (40%) Gaps:139/603 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSLPIFLIQAFL 145
            |.:||...|| ..|....|..|  ..:..|..|   :||. .|:|.|.:.:....||:|.::..|
Zfish    41 REKWASKLDF-LLSVAGGFVGL--GNVWRFPYLCYKNGGG-AFLIPYFIFLFGGGLPVFFLEVAL 101

  Fly   146 GQFSSSGTISAF-RVAPIFKGIGYA----ILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSC 205
            |||:|.|.|:.: ::.|||.|||||    :.|||:    ||.:.....|.|......|.:||.||
Zfish   102 GQFTSEGGITCWEKLCPIFTGIGYASIVIVSLLNI----YYIVILAWGLYYLFQCFQPELPWASC 162

  Fly   206 NNSWNTQEC---SLHEN---YDVDDYRVDPHSTVEFFRSMIASTAKGSTSMS-ISWSMLIGVLSI 263
            ||.|||:.|   :|..|   :...:.........||:...:.|.:.|...:. :.|.:.:.:|::
Zfish   163 NNKWNTENCVEDTLRRNKTLWAAANATNFTSPVTEFWERNVLSISDGIEEVGHVKWDLALCLLAM 227

  Fly   264 WLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTF----DTLHYYWMPQ------ 318
            |::....:.|.|...|||:..:....|     |.|.:|:...||.    :.:.:|..|.      
Zfish   228 WVICFFCVWKGVKSTGKVVYVTATFPF-----VMLIVLLVRGVTLPGAAEGIKFYLYPNVTRLGD 287

  Fly   319 ----LDSFDSILATARTALLMAGGALGPGWGSIITLSSYNNFRRDAERLSIWVCL---------- 369
                :|:...|..:....|           |::.:|.|||.::.:..|    .||          
Zfish   288 PEVWIDAGTQIFFSYAICL-----------GAMTSLGSYNKYKYNCYR----DCLLLGGLNSATS 337

  Fly   370 ------THITIGLM----GLLCCNVAHD-------HFEDHVGMMPLHVDEKHHMQFLYLCFSYLF 417
                  ....:|.|    |:...:||..       .:...|.||||                   
Zfish   338 FVSGFAIFSVLGFMAQEQGVDIADVAESGPGLAFIAYPKAVTMMPL------------------- 383

  Fly   418 GRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFET-LRS--RRILVISSLVFCLTAS 479
                  |..||.|||.|:.|..|.:..:::...||:|.|.:.: ||.  ||.:.|:  :.|..: 
Zfish   384 ------PTFWAILFFIMLLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIA--IVCFVS- 439

  Fly   480 SVYFCTQLGFSQLTQ--LPNLAVFTHLLISGILVL--------MTTWVYGRVRFQCDLQFMLGKT 534
              |.   ||.:.:|:  :....:|.:...||:.:|        ...||||...|...::.|:|..
Zfish   440 --YL---LGLTMVTEGGMYVFQLFDYYAASGVCLLWVAFFECIAVAWVYGADNFYDAIEEMIGYR 499

  Fly   535 ISSFKIFFIRFATP-IFLGLCLFQLT-YLFTR-DRIH---DVLIYVSQGLILLTAI---SYMVYK 590
            .:.:..:.....|| :.:|..:|.|. |...| ::|:   |..|.|...|.|.:.|   ..:|.|
Zfish   500 PNPWMKWSWTVVTPFLCVGCFIFSLVKYAPLRYNKIYEYPDWSIGVGWTLALASMICIPMVVVIK 564

  Fly   591 VCRTNGDWRQRLQQCLAP 608
            :.:::|...:|::...||
Zfish   565 IIQSDGPLIERIKAVAAP 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 136/561 (24%)
slc6a6bNP_001032750.1 SLC6sbd_TauT 41..582 CDD:271398 146/601 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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