DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and si:ch211-132b12.6

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001038523.1 Gene:si:ch211-132b12.6 / 564583 ZFINID:ZDB-GENE-050420-179 Length:577 Species:Danio rerio


Alignment Length:567 Identity:144/567 - (25%)
Similarity:233/567 - (41%) Gaps:102/567 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFL 140
            ||.|.|.|:|..|...:.        |..|.:.        :||. :|:|.||:.::...||:||
Zfish    11 RGFWGKKAEFLLAVAGNVVGLGNVWRFPYLCYR--------NGGG-VFLIPYLVFVVTCGLPLFL 66

  Fly   141 IQAFLGQFSSSGTISAF-RVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMS 204
            ::..:|||:..|.|:.: |:.|:.:|:|||..|..|.:..||:|.....|.|.|:|....:||:|
Zfish    67 LETAMGQFTHEGGITCWHRLCPLAQGVGYAGQLTVLYSCMYYTIILAWALFYLVSSFSSQLPWVS 131

  Fly   205 CNNSWNTQEC----SLHENYDVDDYRVDPHSTVEFFRSMIASTAKGSTSM-SISWSMLIGVLSIW 264
            |||.|||..|    :.:..::.........:..||:...:.|.:.|...: .|:|.:|:.::::|
Zfish   132 CNNIWNTDNCVNLAAGNLTFNRTTLANSTSAATEFWERRVLSLSGGIEDIGKINWEILLCLIAMW 196

  Fly   265 LVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLY-----LLIH--------EQVTFDTLHYYWM 316
            ::....:.|.|...|||:         :|.|.|.|     |||.        :.|.|   :.|..
Zfish   197 IICYFCIWKGVKSTGKVV---------YFTATFPYVMLLVLLIRGLTLPGALQGVVF---YLYPE 249

  Fly   317 PQLDSFDSILATARTALLMAGGALGPGWGSIITLSSYNNFRRDAERLSIWVCLTHI-TIGLMGLL 380
            |...:...:...|.|.:..:.....   |.:|:|.|||.:..:..|.|.|:||.:. |..:.|..
Zfish   250 PARLADPQVWMEAGTQVFFSYSVCS---GILISLGSYNQYSNNCYRDSFWLCLLNSGTSFVAGFA 311

  Fly   381 CCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALII 445
            ..:|.  .|..||..:|:....:......::.:..... ....|.|||..||.||.|..|.:..:
Zfish   312 VFSVL--GFMAHVQGVPVEEVAESGPGLAFIAYPQAMA-MMPFPQLWAVCFFIMIILLGLDSQFV 373

  Fly   446 QMMSVITALFDEF-ETLR--SRRILVISSLVFCLTA--SSVYFCTQLGFSQLTQLPN-------- 497
            .:..|||::.|.| |.||  .||.|.:  |:.|||.  ..:...|:.|........|        
Zfish   374 GIECVITSVMDLFPEVLRRAGRRELFV--LLLCLTCFFGQLIMVTEGGMYVFQLFDNYACNGACL 436

  Fly   498 --LAVFTHLLISGILVLMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGLCLFQLTY 560
              |:||..|.|.        |::|..:....::.|.....:.:.:...::.||:   :.|....|
Zfish   437 LFLSVFESLAIG--------WLFGAEKMFDIIEDMTESRPNYWFMLCWKYLTPL---VSLMSFVY 490

  Fly   561 LFTRDRIHDVLIYVSQGLILLTAISYMVYKVCRTNGDWRQRLQQCLA 607
            ...|        |..     ||...:.||.      ||...|...||
Zfish   491 SMVR--------YTP-----LTFNRWYVYP------DWAYALGWLLA 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 133/520 (26%)
si:ch211-132b12.6NP_001038523.1 SLC6sbd-TauT-like 11..550 CDD:271387 144/567 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.