DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and slc6a7

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_005161359.1 Gene:slc6a7 / 562050 ZFINID:ZDB-GENE-070112-1492 Length:652 Species:Danio rerio


Alignment Length:665 Identity:155/665 - (23%)
Similarity:271/665 - (40%) Gaps:119/665 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ICGEQLNNCMLLGDCENSEHGTE----LPGDFIGEPVETESGGGMGGSLALAARRIRSRQVHSMA 64
            :|.|.|..       ..:|..||    .||:.:.....||:.....|::        |..|.|.:
Zfish     7 LCSEHLKK-------SAAEMPTEEARTAPGNGVITTPSTENPAHQNGAV--------SSPVASQS 56

  Fly    65 VRTGSAYDTLERPYRHDKCRGRWAKSADFYFASC---------THAFSSLIFSELSTFGILHGGW 120
            ....||.....:|.| |:..|::.     :..||         ...|..|.:.        :||.
Zfish    57 QPPSSAASPPAQPPR-DQWGGKYE-----FLLSCIGYCVGLGNVWRFPYLCYR--------NGGG 107

  Fly   121 LLFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAA 185
             :|:|.|.:.:.|..:|:||::..|||:.::|.|:.::..|:.||||..:|.::.....||::..
Zfish   108 -VFLIPYFIMLFFTGMPLFLMELSLGQYGAAGPITVWKCCPLLKGIGIGMLCVSTLVCLYYNVII 171

  Fly   186 VVPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENYDVDDYRVDPHSTVEFFRSMIASTAKGSTSM 250
            .....|..:|....:|| ||:...|...|:...|        ...|..|.|.:........||.:
Zfish   172 AWTFYYLGSSFQSPLPW-SCDALQNIALCANKTN--------STQSPSEVFWNEKVLGVVHSTGL 227

  Fly   251 S----ISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHE---QVTF 308
            |    :.|.:.:.:|:.|:::...:||.:...|||:..:..  |.:|  |.|.|:|..   :.:.
Zfish   228 SDPGPVRWPLALCLLAAWIIIFLCMLKGIHSSGKVVYVTAT--FPYF--VLLVLIIRGATLEGSL 288

  Fly   309 DTLHYYWMPQLDSFDSILATART---ALLMAGGALGPGWGSIITLSSYNNFR----RDAERLSIW 366
            |.:.:|..|:.|.    ||.|:.   |......:||.|.|.:::::|||.|.    ||...::|.
Zfish   289 DGVAFYLTPKWDQ----LADAQVWNDAASQIFYSLGIGVGGLLSMASYNKFDNNVIRDTIIITIG 349

  Fly   367 VCLTHITIG--LMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYL--CFSYLFGRFTTTPNLW 427
            .|.|....|  :..:|    .|..|:..|.:..: .|....:.|:..  ..:.|.|..     .|
Zfish   350 NCSTSFFAGFAIFSIL----GHMAFKKGVPVDKV-ADSGPGLAFVAYPEALALLPGSV-----FW 404

  Fly   428 AFLFFGMIFLSELCALIIQMMSVITALFDEFETLRS---RRILVISSLVFCLTASSVYFCTQLGF 489
            :.|||.|:|:..:..|...|..:.||:.|||..|||   .:.|.::.|.|......:...|..|.
Zfish   405 SILFFLMLFMLGVDTLFGNMEGICTAVLDEFPQLRSNLKHKTLFLAVLCFSFYLMGLLLITDGGI 469

  Fly   490 SQLTQLPNLAV-FTHLLISGILVLMTTWVYGRVRFQCDLQFML-------GKTISSFKIFFIRFA 546
            ...|.:.:.:. |..::|:..:.:..::.||..:|..|:..|:       .|.:..||..::.| 
Zfish   470 YWFTLIDSFSTSFGLIIITLFMCIGISFFYGVNQFCQDIVDMICRCPPWCTKMLLYFKACWVVF- 533

  Fly   547 TPIFLGLCLFQLTYLFTRDRIHDVLIYVSQ--------------GLILLTAISYMVYKVCRTNGD 597
            ||..|   .|.|||:|. :.....|.|.|.              .|..|..:.:.:..:.:.:|.
Zfish   534 TPFLL---TFILTYIFI-EMYRTSLRYGSYVYPIWGKALGVCMGALCCLQILIWAIVAISKESGT 594

  Fly   598 WRQRLQQCLAP-HDW 611
            .:.|.::.:.| :.|
Zfish   595 LKDRFKKSIRPLNSW 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 128/530 (24%)
slc6a7XP_005161359.1 SLC5-6-like_sbd 71..610 CDD:294310 138/586 (24%)
PotE <235..564 CDD:223605 88/351 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.