DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and slc6a6a

DIOPT Version :10

Sequence 1:NP_609140.2 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001119858.1 Gene:slc6a6a / 556480 ZFINID:ZDB-GENE-081104-1 Length:625 Species:Danio rerio


Alignment Length:633 Identity:155/633 - (24%)
Similarity:257/633 - (40%) Gaps:162/633 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DTLE---------RPYRHDKCRG------RWAKSADFYFASCTHAFSSLIFSELSTFGIL---HG 118
            |||:         ||  .|:..|      :||...||.. |....|..|  ..:..|..|   :|
Zfish    16 DTLKPSPGKSPGTRP--EDEAEGKAPQREKWASKLDFVL-SVAGGFVGL--GNVWRFPYLCYKNG 75

  Fly   119 GWLLFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAF-RVAPIFKGIGYA----ILLLNLGTL 178
            |. .|:|.|.:.:....||:|.::..||||:|.|.|:.: ::.|||.|||||    :.|||:   
Zfish    76 GG-AFLIPYFIFLFGGGLPVFFLEVALGQFTSEGGITCWGKLCPIFTGIGYASIIIVSLLNI--- 136

  Fly   179 TYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENYDVDDYRVDPHSTV---------- 233
             ||.:.....|.|.:......:||..|.:||||:.|       |:| .|..:.|:          
Zfish   137 -YYIVILAWGLYYLLQCFQHELPWARCRHSWNTENC-------VED-TVRKNKTLWLSANATNFT 192

  Fly   234 ----EFFRSMIASTAKGSTSM-SISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFF 293
                ||:...:.|.:.|...: .:.|.:.:.:|::|::....:.|.|...|||:         :|
Zfish   193 SPVTEFWERNVLSISSGIDEVGGLKWELALCLLAVWVICFFCIWKGVKSTGKVV---------YF 248

  Fly   294 VAVF----LYLLIHEQVTF----DTLHYYWMPQLDSF--DSILATARTALLMAGGALGPGWGSII 348
            .|.|    |.:|:...||.    :.:.:|..|.|...  ..:...|.|.:..:....   .|::.
Zfish   249 TATFPFLMLIVLLIRGVTLPGATEGIKFYLYPDLSRLKDPEVWIDAGTQIFFSYAIC---LGAMT 310

  Fly   349 TLSSYNNFR----RDAERLSIWVCLTHIT-----------IGLM----GLLCCNVAHD------- 387
            :|.|||.::    ||...|.   ||...|           :|.|    |:...:||..       
Zfish   311 SLGSYNKYKYNCYRDCMLLG---CLNSGTSFVSGFAIFSVLGFMAQEQGIAIADVAESGPGLAFI 372

  Fly   388 HFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVIT 452
            .:...|.||||                         |.:||.|||.|:.|..|.:..:::...||
Zfish   373 AYPKAVTMMPL-------------------------PTVWAILFFIMLLLLGLDSQFVEVEGQIT 412

  Fly   453 ALFDEFETLRS---RRILVISSLVFCLTASSVYFCTQLGFSQLTQ--LPNLAVFTHLLISGILVL 512
            :|.|.:.:|..   ||.:.|:  |.|:.:   |.   ||.:.:|:  :....:|.:...||:.:|
Zfish   413 SLVDLYPSLLRKGYRREIFIA--VICVIS---YL---LGLTMVTKGGMYVFQLFDYYAASGVCLL 469

  Fly   513 --------MTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIF-LGLCLFQLTYL--FTRDR 566
                    ...||||...|...::.|:|...:|:..:.....||:. :|..:|.|...  .|.::
Zfish   470 WVAFFECVAVAWVYGADNFYDAIEDMIGYRPNSWMKWSWMLITPVLCVGCFVFSLVKYKPLTYNK 534

  Fly   567 IH---DVLIYVSQGLILLTAI---SYMVYKVCRTNGDWRQRLQQCLAP 608
            ::   |..|.:...|.|.:.|   ..:|.|:.:::|...:|::...||
Zfish   535 LYKYPDWSIGLGWALALASMICIPMMVVIKIIQSDGSLIERIKAVAAP 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_609140.2 SLC5-6-like_sbd 123..610 CDD:444915 137/564 (24%)
slc6a6aNP_001119858.1 SLC6sbd_TauT 41..582 CDD:271398 146/604 (24%)

Return to query results.
Submit another query.