DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and Slc6a8

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_059044.1 Gene:Slc6a8 / 50690 RGDID:619711 Length:635 Species:Rattus norvegicus


Alignment Length:684 Identity:153/684 - (22%)
Similarity:259/684 - (37%) Gaps:166/684 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SEHGTELPGDFI-----GEPVETESGGGMGGSLALAARRIRSRQVHSMAVRTGSAYDTLERPYRH 80
            |..|.|..|..|     |.|.:.:...|:|   |.::|         :||..             
  Rat    12 SVSGDEKKGPLIVSGPDGAPSKGDGPAGLG---APSSR---------LAVPP------------- 51

  Fly    81 DKCRGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLP 137
               |..|.:..||..:....|        |..|.:.        :||. :|:|.|::..|...:|
  Rat    52 ---RETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYK--------NGGG-VFLIPYVLIALVGGIP 104

  Fly   138 IFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPW 202
            ||.::..||||..:|:|:.:.:.|:|||:|||.:::.....|||.:.......|.|.|....:||
  Rat   105 IFFLEISLGQFMKAGSINVWNICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPW 169

  Fly   203 MSCNNSWNTQEC---SLHE--------NYDVDDYRVDPHSTVEFFRSMIASTAKG-STSMSISWS 255
            .:|.::|||.:|   ..||        |...|.........:||:.:.:...:.| ....:::|.
  Rat   170 ATCGHTWNTPDCVEIFRHEDCANASLANLTCDQLADRRSPVIEFWENKVLRLSTGLEVPGALNWE 234

  Fly   256 MLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLY-----LLIHEQV---TFDTLH 312
            :.:.:|:.|::|...:.|.|...||::         :|.|.|.|     ||:...:   ..|.:.
  Rat   235 VTLCLLACWVLVYFCVWKGVKSTGKIV---------YFTATFPYVVLVVLLVRGVLLPGALDGII 290

  Fly   313 YYWMPQLDSFDS--ILATARTALLMAGGALGPGWGSIITLSSYNNFRRDAERLSIWVCLTH---- 371
            ||..|......|  :...|.|.:..   :...|.|::..|.|||.|..:..:.:|.:.|.:    
  Rat   291 YYLKPDWSKLGSPQVWIDAGTQIFF---SYAIGLGALTALGSYNRFNNNCYKDAIILALINSGTS 352

  Fly   372 -----ITIGLMGLLCCNVAHDHFEDHVGMMPLHVDE--KHHMQFLYLCFSYLFGRFTTTPNLWAF 429
                 :...::|.:...            ..:|:.:  :......::.:..........| |||.
  Rat   353 FFAGFVVFSILGFMATE------------QGVHISKVAESGPGLAFIAYPRAVTLMPVAP-LWAA 404

  Fly   430 LFFGMIFLSELCALIIQMMSVITALFD------EFETLRSRRILVISSLVFCLTASSVYFCTQLG 488
            |||.|:.|..|.:..:.:...||.|.|      .|...|...:.:..:|.|.:..|.|   |. |
  Rat   405 LFFFMLLLLGLDSQFVGVEGFITGLLDLLPASYYFRFQREISVALCCALCFVIDLSMV---TD-G 465

  Fly   489 FSQLTQLPNLAVFTHLLISGILVL--------MTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRF 545
            ...:.||     |.:...||..:|        :..||||..||..|:..|:|.....:..:...|
  Rat   466 GMYVFQL-----FDYYSASGTTLLWQAFWECVVVAWVYGADRFMDDIACMIGYRPCPWMKWCWSF 525

  Fly   546 ATP-IFLGLCLFQLTYLFTRDRIHDVLIYVS--------QGLILLTAISYMVYKVC--------- 592
            .|| :.:|:.:|.:.|       :..|:|.:        :.:....|:|.|   :|         
  Rat   526 FTPLVCMGIFIFNVVY-------YKPLVYNNTYVYPWWGEAMGWAFALSSM---LCVPLHLLGCL 580

  Fly   593 -RTNGDWRQRLQQCLAP-----H-DWHPVDADNR 619
             |..|...:|.|....|     | ::...|||.|
  Rat   581 LRAKGTMAERWQHLTQPIWGLHHLEYRAQDADVR 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 127/558 (23%)
Slc6a8NP_059044.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 11/46 (24%)
SLC6sbd_CT1 52..621 CDD:271397 140/616 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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