DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and RGD1562492

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001102616.1 Gene:RGD1562492 / 499151 RGDID:1562492 Length:743 Species:Rattus norvegicus


Alignment Length:542 Identity:120/542 - (22%)
Similarity:199/542 - (36%) Gaps:127/542 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 FIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAV 186
            |::.||:.:|...:|:..::..:||:.....|.|:: :.|...|:||:.:|.....:.|.|....
  Rat    87 FLLMYLILLLLLGIPLMYMEMVIGQWLRVDNIRAWKHLVPWLSGVGYSSMLACALVILYNSALVS 151

  Fly   187 VPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENY---DVDDYRVDPHSTVEFFRSMIASTAKGST 248
            ..|.|...|.....||         :.|.|.:|:   |:...|.:||....:...:.||.     
  Rat   152 WSLFYLGQSFDYPTPW---------ENCPLVKNFSTSDISCLRTEPHQFFWYHTVLRASD----- 202

  Fly   249 SMSISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSC-------------VLMFGFFVAVFLYL 300
              .|...:.:.||::.|.:.|...  ..:|..|.|...             ||:|.||..:|...
  Rat   203 --QIEEGIEVLVLNVTLCLFATWF--FLYITMVTRIKISVLMMIFSILFPNVLLFCFFTHIFFVK 263

  Fly   301 LIHEQVTFDTLHYYWMPQLDSFDSILATARTALLMAGG----ALGPGWGSIITLSSY----NNFR 357
            .:.     |:|......:|    ||||:. .|...|||    :||.|.|:|||.|||    .|:.
  Rat   264 GVR-----DSLKRLVTTEL----SILASL-DAWRQAGGHVLYSLGLGMGTIITFSSYQTRGENYI 318

  Fly   358 RDAE-------------------RLSIWV------CLTHITIGLMGLLCCNVAHD---------- 387
            :.|.                   .|..|:      |:......|:.|:...|...          
  Rat   319 KWASFVAMVNLMTSLLSSSVIFLMLGFWIENSGTPCVESNVSNLLSLIANGVLPQVAWPPKDIIH 383

  Fly   388 ----HFEDHVGMMPLHV-DEKHHM-----------QFL------YLCFSYLFGRFTTTPNLWAFL 430
                .:.|.:..:|.:: :|..|.           :|:      |:.||.....|..: :.||.:
  Rat   384 RSPLEYLDWISQLPKNIRNEVAHFTLPCSILVQKEKFMEGPGLAYVAFSQAITLFPGS-SFWAII 447

  Fly   431 FFGMIFLSELCALIIQMMSVITALFDEFETLRSRRILVISSLVFCLTASSVYFCTQLGFSQLTQL 495
            ||..:.:..|..:...:..:..:|.....||.....||  .::.||..    |...|.||.....
  Rat   448 FFMSLVIMGLGTMTTLVEGIALSLQKSISTLEKHPKLV--PVIICLGG----FLGSLVFSSRPGS 506

  Fly   496 PNLAVFTHLLISGILVLMT-------TWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGL 553
            ..:.:|...|:..:|:::.       .||||..||:.::...||:.:.:...|...:.|   |..
  Rat   507 YVVFLFDDHLVPMVLIMIVAFQNLSLAWVYGIKRFRAEMFGQLGRLVWAPFTFLWSYVT---LPT 568

  Fly   554 CLFQLTYLFTRDRIHDVLIYVS 575
            .|..||..|......:.|.|||
  Rat   569 LLVLLTIYFLNLYFSESLSYVS 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 120/542 (22%)
RGD1562492NP_001102616.1 SLC5-6-like_sbd 50..621 CDD:382020 120/542 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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