DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and slc6a9

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_005163551.1 Gene:slc6a9 / 494490 ZFINID:ZDB-GENE-050105-3 Length:653 Species:Danio rerio


Alignment Length:621 Identity:151/621 - (24%)
Similarity:274/621 - (44%) Gaps:125/621 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PYRHDK--CRGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSL 136
            |.:.|:  .||.|....:|...|..:|..   ...:..|..|   :||. .|:..|.:.::|..:
Zfish    22 PVKRDENSRRGNWGNQIEFVLTSVGYAVG---LGNVWRFPYLCYRNGGG-AFMFPYFIMLVFCGI 82

  Fly   137 PIFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIP 201
            |:|.::...|||:|.|.:..::|:|:|||:||.:::::.....||::...:...|...|:..::|
Zfish    83 PLFFLELSFGQFTSLGCLGVWKVSPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFMSMTNLLP 147

  Fly   202 WMSCNNSWNTQECSLHENYDVDDYRVD----------------------PHSTVEFFRSMIASTA 244
            |..|||.|||.:||    ..|..:|.:                      ...:.|::|:.:.:.:
Zfish   148 WTYCNNPWNTPDCS----GVVSTHRANATFANMSAVVSGVTEIVNRTKRTSPSEEYWRNYVLNIS 208

  Fly   245 KGSTSMSISWSMLIGVLSI-WLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLY----LLIHE 304
            .|..:.......::|.|:: |.||...|::.|...|||:         :|.|.|.|    :|...
Zfish   209 DGIGNFGEVRLPILGCLAVSWFVVFLCLIRGVKSSGKVV---------YFTATFPYVVLTILFIR 264

  Fly   305 QVTFD----TLHYYWMPQ----LDSFDSILATARTALLMAGGALGPGWGSIITLSSYNNFR---- 357
            .:|.|    .:.||..||    ||:  .:...|.:.:..   :||..||.:||::|||.|.    
Zfish   265 GITLDGAISGIKYYLTPQWQKILDA--KVWGDAASQIFY---SLGCAWGGLITMASYNKFHNNCF 324

  Fly   358 RDAERLSIWVCLTHITIG-----LMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLF 417
            ||:..:|:..|.|.:..|     ::|.:    ||     |:|:....|.: |.....::.:....
Zfish   325 RDSIIISVTNCGTSVYAGFVIFSILGFM----AH-----HLGVDVSEVAD-HGPGLAFVAYPEAL 379

  Fly   418 GRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFET---LRSRRILVISSLV--FCLT 477
            .....:| ||:.|||.|:.|..|......:.:::||:.||..|   ::::..:.:...:  |.| 
Zfish   380 TLLPISP-LWSLLFFFMLILLGLGTQFCLLETLVTAVVDEIGTDWIIKNKTYVTLGVAIIGFLL- 442

  Fly   478 ASSVYFCTQLGFSQLTQLPNLAV-FTHLLISGILVLMTTWVYGRVRFQCDLQFMLGKTISSFKIF 541
              .|...||.|...|..:.|.|. |:.::||.|:.:...:|||...:..|::.|||         
Zfish   443 --GVPLTTQAGIYWLLLMDNYAASFSLVIISCIMCICIMYVYGHKNYFKDVEMMLG--------- 496

  Fly   542 FIRFATPIFLGLCL-----FQLTY--LFT----RDRIHDVLIYVSQGLILLTAIS---------Y 586
               |..|||..:|.     |.:|:  :||    :...::..:|....|::..|::         |
Zfish   497 ---FPPPIFFRICWRYVSPFIITFILIFTVIQYKPITYNDYVYPGWSLVIGFAMALSSVICIPIY 558

  Fly   587 MVYKVCRTNGD-WRQRLQQCLAPH-DWHPVDADNRR 620
            .::|:..:.|. :.:||:..:.|. ||.|...::|:
Zfish   559 ALFKIAMSEGSTFLERLKNSVKPDPDWGPALQEHRK 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 135/558 (24%)
slc6a9XP_005163551.1 SLC6sbd_GlyT1 15..598 CDD:212067 151/621 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.