DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and slc6a1b

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:554 Identity:148/554 - (26%)
Similarity:244/554 - (44%) Gaps:53/554 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGILHG--GWLLFIIAYLMGMLFYSLPIFLIQAFLG 146
            |..|....||..:...:|..   ...:..|..|.|  |...|:|.|.:.::|..:|:|.::..||
Zfish    43 RETWQGKFDFLLSCVGYAIG---LGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLETALG 104

  Fly   147 QFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNT 211
            |::|.|.:..:::||:|||:|.|..:|:.....||.:.....:.|..||....:||.||:|.|||
Zfish   105 QYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTDLPWKSCDNPWNT 169

  Fly   212 QECSLHENYDVDDYRVDPHSTVEFF-RSMIASTAKGSTSMSISWSMLIGVLSIWLVVLALLLKPV 275
            .:|  ..||.:.:......:.|||: |:|...|........|...:.|.:...|::|...:.|.|
Zfish   170 DKC--FSNYSMANIGNMTSAVVEFWERNMHQLTDGLEKPGEIRLPLAITLAIAWVLVYFCIWKGV 232

  Fly   276 AFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTF----DTLHYYWMPQLDSF--DSILATARTALL 334
            .:.|||:..|..  :.:|:   |::|....||.    :.:.:|..|:....  ..:...|.|.:.
Zfish   233 GWTGKVVYFSAT--YPYFM---LFILFIRGVTLPGAKEGILFYVTPEFSKLKESEVWLDAATQIF 292

  Fly   335 MAGGALGPGWGSIITLSSYNNFRRDAERLSIWV-CLTHITIGLMGLLCCNVAHDHFEDHVGMMPL 398
            .   :.|.|.||:|.|.|||.|..:..:.||.| |:...|....|.:..::.  .|..|:...|:
Zfish   293 F---SYGLGLGSLIALGSYNPFNNNVYKDSIIVCCINSFTSMFAGFVIFSIV--GFMAHITKRPI 352

  Fly   399 HVDEKHHMQFLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEF-ETLR 462
            ...........:|.:.....:...:| |||.|||.|:.:..:.:....:...||||.||| ..||
Zfish   353 ADVAASGPGLAFLAYPEAVTQLPISP-LWAVLFFSMLLMLGIDSQFCTVEGFITALVDEFPRALR 416

  Fly   463 SRRILVISSLVFCLTASSVYFCTQLGFSQLTQ--LPNLAVFTHLLISGILVLM--------TTWV 517
            .||.:.|:  |.||.:   |.   :|.|.:||  |....:|.:...||:.:|.        .:|.
Zfish   417 GRREIFIA--VVCLVS---YL---IGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECVSISWF 473

  Fly   518 YGRVRFQCDLQFMLG-KTISSFKIFFIRFATPIFLGLCLFQLTYLFTRDRIHDVLIYVSQGLILL 581
            ||..:|..:|:.|:| |....:|:.::.|...|..|:.||....:......:.|.....||:...
Zfish   474 YGVNKFYGNLEEMIGYKPCIWWKLCWVVFTPLIVAGVFLFSAVQMVPLTLNNYVFPKWGQGVGWC 538

  Fly   582 TAIS-------YMVYKVCRTNGDWRQRLQQCLAP 608
            .|:|       ||.|......|.:::||:..:.|
Zfish   539 MALSSMVLIPGYMGYMFLTLKGSYKERLRIMIQP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 139/513 (27%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:294310 148/554 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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