DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and slc6a19b

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:607 Identity:131/607 - (21%)
Similarity:233/607 - (38%) Gaps:128/607 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSLPIFLIQAFL 145
            |.:|...|. |..:|......|  ..:..|..|   |||. .|:|.:|:.::|..:|:..::..:
Zfish    33 RPKWDNKAQ-YMLTCVGFCVGL--GNVWRFPYLCQSHGGG-AFMIPFLILLVFEGIPLLHLEFAI 93

  Fly   146 GQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSW 209
            ||....|::..:| :.|...|:|.|.:.::.....||:......:.|..||....:||       
Zfish    94 GQRLRKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPLPW------- 151

  Fly   210 NTQECSLHENYDVDDYRVDP------HSTVEFF---RSMIASTAKGSTSMSISWSMLIGVLSIWL 265
              .:|.::||      |..|      .|.|::|   .::..|.|...|.....| |::.::|.|.
Zfish   152 --SQCPINEN------RTGPIPECGKSSPVDYFWYRETLNTSAAIDDTGGLQVW-MVLCLISAWA 207

  Fly   266 VVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTFDTLHYYWMPQLDSFDSILATAR 330
            |:....::.:...||.:..:..|.: ..:.:||...:..:.:.|.:.:.:.|.::.    ||...
Zfish   208 VLYVCCIRGIETTGKAVYVTSTLPY-LVLTIFLIRGLTLKGSVDGIKFLFTPDINE----LANPS 267

  Fly   331 TALLMAGG----ALGPGWGSIITLSSY----NNFRRDAERLSIWVCLTHI--------TIGLM-- 377
            | .|.||.    :....:|.:|:.|||    ||..:||..:|:....|.|        .||..  
Zfish   268 T-WLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFTSIYAATVIYSIIGFRAT 331

  Fly   378 ----------------------GLLCCNVAHDHFE-------DHVGMMPLHVDEKHHMQFL---- 409
                                  |.:..:...|.|:       |.:..:.|...:.::  ||    
Zfish   332 ERFDDCMNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSLSLKTCDLNN--FLSEGV 394

  Fly   410 ------YLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFD--EFETLRSRRI 466
                  ::.|:....:...:| ||:.|||.|:|...|.::...:..|:..|.|  .|.....:.|
Zfish   395 EGTGLAFIVFTEAITKMPLSP-LWSVLFFIMLFCLGLSSMFGNIEGVLVPLQDLGVFPKSWPKEI 458

  Fly   467 LV-ISSLVFCLTASSVYFCTQLGFSQLTQLPNLAVFTHLLISGILVLM-TTWVYGRVRFQCDLQF 529
            :. ::.||.||.  .:.|....|...|....:.|....|||.....:: ..:|||..||..||.|
Zfish   459 ISGVTCLVCCLV--GLIFVQGSGNYWLALFDSFAGSIPLLIIAFSEMIGVVYVYGIDRFNEDLIF 521

  Fly   530 MLGKTISSFKIFFIRFATP-IFLGLCLFQLTYLFTRDRIHD----------------------VL 571
            |:|...:.|.....||.:| |.|.:.:|..:...|::..:.                      |:
Zfish   522 MIGHKPNIFWQATWRFISPLIMLAIFVFYFSTTVTKEIFYSAWDPESENFPTLEKKPYPTWIYVI 586

  Fly   572 IYVSQGLILLTAISYMVYKVCR 593
            |::..|:..|......|::..|
Zfish   587 IFLLAGVPSLAVPGTAVFRAIR 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 120/565 (21%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 131/607 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.