DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and Slc6a14

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_038955501.1 Gene:Slc6a14 / 298340 RGDID:1561810 Length:646 Species:Rattus norvegicus


Alignment Length:629 Identity:157/629 - (24%)
Similarity:250/629 - (39%) Gaps:157/629 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFL 140
            ||.|:|.:|:..:...:|        |..|.::        :||. .|:|.|.:.:....||:|.
  Rat    42 RGNWSKKSDYLLSMVGYAVGLGNVWRFPYLTYT--------NGGG-AFLIPYAIMLALAGLPLFF 97

  Fly   141 IQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSC 205
            ::..||||:|.|.:|.:|:.|:|:|:|..::|:::....||::.....|.|...|...|:||.:|
  Rat    98 LECSLGQFASLGPVSVWRILPLFQGVGITMVLISIFVTIYYNVIIAYSLYYLFASFQSVLPWANC 162

  Fly   206 NNSWNTQECSLHENYDVDDYRVDPHSTVEFFR--SMIAS-------------------------- 242
            ::||....||  ....|...||...:..:.|.  |.:.|                          
  Rat   163 SSSWADDNCS--RQPIVTGCRVSTDTGGDMFMNISWVNSNNFTCLNGSEVFRPGQLPSEQYWDKV 225

  Fly   243 TAKGSTSMS----ISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLY---- 299
            |.:.|:.|.    |.|.:.:.:|..|::|.|.|.|.:...|||:         :|.|:|.|    
  Rat   226 TLRRSSGMDETGVIVWYLALCLLLAWIIVGAALFKGIKSSGKVV---------YFTALFPYVVLL 281

  Fly   300 LLIHEQVTFD----TLHYYWMPQLDSFDSILATARTALLMAGGA------LGPGWGSIITLSSYN 354
            :|:....|.:    .:.||...|     |.....|.|.:....|      |...||.::.|||||
  Rat   282 ILLIRGATLEGASKGISYYIGAQ-----SNFTKLREAEVWKDAATQIFYSLSVAWGGLVALSSYN 341

  Fly   355 NFRRDAERLSIWVCLTH-ITIGLMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLF- 417
            .|..:....:|.||||: :|....|....::        :|.| .|:..|...|.:...|...| 
  Rat   342 KFNNNCYSDAIIVCLTNCLTSVFAGFAIFSI--------LGHM-AHISGKEVSQVVKSGFDLAFI 397

  Fly   418 -----------GRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFE----------TL 461
                       |.|      |:.|||.|:....|.:....:.::.|.:.|.|.          ||
  Rat   398 AYPEALAQLPGGPF------WSILFFFMLLTLGLDSQFASIETITTTIQDLFPKAMKRMRVPITL 456

  Fly   462 RSRRILVISSLVFCLTASSVY-------FCTQLGFSQLTQLPNLAVFTHLLISGILVLMTTWVYG 519
            ....||.:..|| |:|.:.:|       ||...|         :.:...|.|:||:     |:||
  Rat   457 GCCLILFLLGLV-CVTQAGIYWVHLIDHFCAGWG---------ILIAAILEIAGII-----WIYG 506

  Fly   520 RVRFQCDLQFMLGKTISSFKI-----FFIRFATPIFLGLCLFQLTYLFTRDRIHDVLIYVSQGLI 579
            ..||..|::.|:|.....|.:     :|:  .|||.|...|......|.|....|: .|...|:.
  Rat   507 GNRFIEDIEMMIGAKRWLFWLWWRACWFV--ITPILLSAILVWSLVKFHRPNYADI-PYPDWGVA 568

  Fly   580 L--------LTAISYM-VYKVCRTNGDWRQRLQQCLAP-HDWHP 613
            |        :..|..| :.|:.|..|:..||:.:|..| .:|.|
  Rat   569 LGWCMIIFCIIWIPIMAIIKIVRAEGNILQRIIKCCRPASNWGP 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 145/577 (25%)
Slc6a14XP_038955501.1 SLC6sbd_ATB0 42..645 CDD:271391 157/629 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.