DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and Slc6a1

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_848818.1 Gene:Slc6a1 / 232333 MGIID:95627 Length:599 Species:Mus musculus


Alignment Length:572 Identity:156/572 - (27%)
Similarity:249/572 - (43%) Gaps:85/572 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGILHG--GWLLFIIAYLMGMLFYSLPIFLIQAFLG 146
            |..|....||..:...:|..   ...:..|..|.|  |...|:|.|.:.::|..:|:||::..||
Mouse    44 RDTWKGRFDFLMSCVGYAIG---LGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLG 105

  Fly   147 QFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNT 211
            |::|.|.:..:::||:|||:|.|..:|:.....||.:.....:.|..||....:||..|:|.|||
Mouse   106 QYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNT 170

  Fly   212 QECSLHENYDVDDYRVDPHSTVEFF-RSMIASTAKGSTSMSISWSMLIGVLSIWLVVLALLLKPV 275
            ..|  ..||.:.:......:.|||: |:|...|........|.|.:.|.:...|::|...:.|.|
Mouse   171 DRC--FSNYSLVNTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGV 233

  Fly   276 AFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTF----DTLHYYWMPQLD--SFDSILATARTALL 334
            .:.|||:..|....:     :.|.:|....||.    :.:.:|..|...  |...:...|.|.:.
Mouse   234 GWTGKVVYFSATYPY-----IMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIF 293

  Fly   335 MAGGALGPGWGSIITLSSYNNFRRDAERLSIWV-CLTHITIGLMGLLCCNVAHDHFEDHVGMMPL 398
            .   :.|.|.||:|.|.|||:|..:..|.||.| |:...|....|.:..::        ||.| .
Mouse   294 F---SYGLGLGSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSI--------VGFM-A 346

  Fly   399 HVDEKHHMQ-------FLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFD 456
            ||.::....       ..:|.:.....:...:| |||.|||.|:.:..:.:....:...||||.|
Mouse   347 HVTKRSIADVAASGPGLAFLAYPEAVTQLPISP-LWAILFFSMLLMLGIDSQFCTVEGFITALVD 410

  Fly   457 EF-ETLRSRRILVISSLVFCLTASSVYFCTQLGFSQLTQ--LPNLAVFTHLLISGILVLM----- 513
            |: ..||:||.|.|:::  |:.:   |.   :|.|.:||  :....:|.:...||:.:|.     
Mouse   411 EYPRLLRNRRELFIAAV--CIVS---YL---IGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFE 467

  Fly   514 ---TTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFL-GLCLF---QLT------YLFTRD 565
               .:|.||..||..::|.|:|.....:......|.|||.: |:.||   |:|      |:|.: 
Mouse   468 CVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPK- 531

  Fly   566 RIHDVLIYVSQGLILLTAIS-------YMVYKVCRTNGDWRQRLQQCLAPHD 610
                    ..||:..|.|:|       ||.|......|..:||||..:.|.:
Mouse   532 --------WGQGVGWLMALSSMVLIPGYMAYMFLTLKGSLKQRLQVMIQPSE 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 147/529 (28%)
Slc6a1NP_848818.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
SLC6sbd_GAT1 2..599 CDD:212075 156/572 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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