DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and snf-10

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_505682.2 Gene:snf-10 / 191769 WormBaseID:WBGene00004909 Length:673 Species:Caenorhabditis elegans


Alignment Length:671 Identity:144/671 - (21%)
Similarity:262/671 - (39%) Gaps:155/671 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SLALAARRIRSRQVHSMAVRTGSAYDTLERPYRHDKCRGRW-AKSADFYFASCTHAFSSLIFSEL 110
            |.|.|...|..:.|.::|:........:|.|    ....:| |.:|...|.:|:.  :...|..|
 Worm    48 SNATAISNIGFKSVTNLALENIGLDTKMEGP----TWTSKWEAITATLSFVTCSG--NIWFFPYL 106

  Fly   111 STFGILHGGWLLFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAF-RVAPIFKGIGYA---IL 171
            ..:   :|||  |...:....:|.::|:..::..|||::|:..:|.| |:||...|:...   |:
 Worm   107 CGY---YGGW--FPYQFTFCYVFIAVPLLYLETALGQYASASPLSVFSRMAPAMAGLSAGMCFIM 166

  Fly   172 LLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENYDVDD--YRVDPHSTVE 234
            :....:|:.::|..:....:...||....||.||..|.:...|   .||.:..  ..:.|.|..|
 Worm   167 VFRTISLSVWAIYDLTIFTHASQSIWSTSPWESCQESQSGDYC---VNYKLSSKCTWIQPGSDKE 228

  Fly   235 F--FRSMIASTA------------------KGSTSMSISWS--------------MLIGVLSI-- 263
            .  ::.|:.:|.                  |.|.:|: .|.              ::||::||  
 Worm   229 CDEYQEMLIATRGFQQRKSPFMSFVHGLMYKRSITMN-DWEPPSVTSIICAVCLWIIIGIISIGG 292

  Fly   264 -------WLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTFDTLHYY------- 314
                   .:|.|.|||     :|.::    :|.:|        :.:::.....|..:|       
 Worm   293 SKVLGRTGIVALTLLL-----VGTIM----LLSYG--------MSLNDTTNVFTAFFYQSEGYED 340

  Fly   315 -WMPQLDSFDSILATARTALLMAGGALGPGWGSIITLSSYNNF----RRDAERLSIWVCLTHITI 374
             ||......|:.....|        ||..|.|.|...:|.|||    .||...:||...:.:|..
 Worm   341 KWMWVWSWADAAAHALR--------ALNVGCGGIQKFASLNNFHNKIHRDVLLISIVSFVFYICT 397

  Fly   375 GLMGLLCCNVAHDHFEDHVGMM---PLHVDEKHHMQFLYLCFSYLFGRFTTTP---NLWAFLFFG 433
            ||:..:        |...:|.:   .|...|:..:....:....:.....|..   ::|.|||: 
 Worm   398 GLLSFM--------FMAEIGRLYYPDLEASERIQLYATPVMIESVISEILTNSSMGSIWVFLFW- 453

  Fly   434 MIFLSELCALIIQMMS----VITALFDEFETLR-SRR--------------ILVISSLVFCLTAS 479
                ..|.|..||.:|    ||:::.  .|.|. |||              ||.|.|:...:  |
 Worm   454 ----LTLAACSIQGISSYIWVISSMI--VERLNGSRRKYGKALASWHKRAIILAIMSVTGLI--S 510

  Fly   480 SVYFCTQLGFSQLTQLPNLAVFTHLLISGILVLMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIR 544
            |:.|....|.:.::.:...|.:..:.|:.:.|:..::|||..||..:::.|:|........:::.
 Worm   511 SLPFLGNGGINLMSSIETFASYGTIFIAFVEVITVSYVYGFKRFSVNIRAMIGGHGPPNVFWWLN 575

  Fly   545 F--ATPIFLGLCLFQLTYLFTRDRIHDVLIYVSQ----GLILLTAISYMVYKVCRTNGDWRQRLQ 603
            :  .:||.|.:....:...|.:.:..:....||.    .|:::..|..::| ..|...|.|:.::
 Worm   576 WLVISPILLIVTFGCIVATFGQKKAFNENSIVSDPIGYSLLVMPCIFVILY-FLRDEYDRRKNME 639

  Fly   604 QCL----APHDWHPVDADNRR 620
            ..:    |..||.|::.::||
 Worm   640 PFVVMIRATGDWGPMNPEDRR 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 121/582 (21%)
snf-10NP_505682.2 SNF 78..628 CDD:264495 128/607 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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