DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and snf-6

DIOPT Version :10

Sequence 1:NP_609140.2 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001367976.1 Gene:snf-6 / 191768 WormBaseID:WBGene00004905 Length:714 Species:Caenorhabditis elegans


Alignment Length:621 Identity:151/621 - (24%)
Similarity:268/621 - (43%) Gaps:107/621 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LERPYR-------HDKCRGRWAKSADFYFA--------SCTHAFSSLIFSELSTFGILHGGWLLF 123
            :|.|:.       .::.||.|:..:|:..|        .....|..|:|.        ||| ..|
 Worm    47 IEYPFEEITGVGDENRIRGNWSNKSDYLLAVIGFTAGVGSFWKFPFLVFQ--------HGG-AAF 102

  Fly   124 IIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVP 188
            ::.||..:...|||:|.::..|||||||..||.::|.|:|||||:|.:.::.....:::|.:...
 Worm   103 LVPYLCMLCLASLPMFFMEMVLGQFSSSAAISVWKVVPLFKGIGFAQVTISGFFAVFFNIISAWT 167

  Fly   189 LIYTVNSIHPVIPWMSCNNSWNTQECSLH--------------------ENYDVDDYRVDP-HS- 231
            |.|.:||....|||.:|.|||:.:.|:|.                    |:...::..|.| |. 
 Worm   168 LFYLINSFSFSIPWSNCANSWSGENCTLGTRIQCKEMNGTLLVNGSCIVEHASSNETTVIPLHDL 232

  Fly   232 ----TVEFFRSMIASTAKGSTSM-SISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMF- 290
                ::::|.:.:...:||.... :::|.:.:.||:.|:.|...|.:.|...|||:..:.::.| 
 Worm   233 GSIPSLKYFHNDVLMLSKGVDDFGTLNWYLGLCVLACWIAVFLCLFQGVKSSGKVVYVAVIVPFI 297

  Fly   291 -------------GFFVAVFLYLLIHEQVTFDTLHYYWMPQLDSFDSILATARTALLMAGGALGP 342
                         |...|||.:|....::..| ||.:....:.:|.|:...:             
 Worm   298 ILTVLLTRLLTLDGSLAAVFYFLTPKWEILMD-LHVWGEAAVQAFYSVSCCS------------- 348

  Fly   343 GWGSIITLSSYNNFRRDAERLSIW-VCLTHITIGLMGLLC--CNVAHDHFEDHVGMMPLHVDEKH 404
              |.:.|::||:.|..:..: .|| |.:..:.:.|:|.|.  ..:....:|..:.:...|:.:..
 Worm   349 --GGLFTIASYSRFHNNIYK-DIWLVLIVDVIVSLVGCLLTFSAIGFTCYEFAISLDKFHIRDGF 410

  Fly   405 HMQFLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEF-ETLRSRRILV 468
            |:.|::|. ..|.|  .:...|:|.|||.||.|......:..:.::::::.||: |.||..|..|
 Worm   411 HLVFVFLA-EALAG--VSVAPLYAGLFFIMILLVVHATQMFVVETIVSSICDEYPERLRRNRRHV 472

  Fly   469 ISSLVFCLTASSVYFCTQLGFSQLTQLPNLAVFTHLLISGILVLMT-TWVYGRVRFQCDLQFMLG 532
            ::::.......|:.||...|...:..|....:...|::...|..|. .||||......:.::::|
 Worm   473 LTTVCALFILLSIPFCLSSGLFWMELLTQFVLTWPLVVIAFLECMAINWVYGVDNMLDNAKWIVG 537

  Fly   533 ---KTISSFKIFFIRFATP-IFLG-LCLFQL--------TYLFTRDRIHDVLIYVSQGLILLTAI 584
               .....:||.| :|..| ::|. ||...|        :|.|....|.......|..|||:..:
 Worm   538 YWPPCYIFWKILF-KFICPMVYLAILCFLWLDWNSIQYESYQFPYWSILTAWCIASFPLILIPIV 601

  Fly   585 SYMVYKVCRTNGDWRQRLQQCLAPHD-WHPVDADNR 619
            .  :::.|...|...|:..:.|.|.| |.|..|.:|
 Worm   602 G--IWQFCIAKGTITQKWWRVLYPDDAWGPAMAIHR 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_609140.2 SLC5-6-like_sbd 123..610 CDD:444915 133/545 (24%)
snf-6NP_001367976.1 SLC5-6-like_sbd 64..639 CDD:444915 149/604 (25%)

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