DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and snf-6

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001367976.1 Gene:snf-6 / 191768 WormBaseID:WBGene00004905 Length:714 Species:Caenorhabditis elegans


Alignment Length:621 Identity:151/621 - (24%)
Similarity:268/621 - (43%) Gaps:107/621 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LERPYR-------HDKCRGRWAKSADFYFA--------SCTHAFSSLIFSELSTFGILHGGWLLF 123
            :|.|:.       .::.||.|:..:|:..|        .....|..|:|.        ||| ..|
 Worm    47 IEYPFEEITGVGDENRIRGNWSNKSDYLLAVIGFTAGVGSFWKFPFLVFQ--------HGG-AAF 102

  Fly   124 IIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVP 188
            ::.||..:...|||:|.::..|||||||..||.::|.|:|||||:|.:.::.....:::|.:...
 Worm   103 LVPYLCMLCLASLPMFFMEMVLGQFSSSAAISVWKVVPLFKGIGFAQVTISGFFAVFFNIISAWT 167

  Fly   189 LIYTVNSIHPVIPWMSCNNSWNTQECSLH--------------------ENYDVDDYRVDP-HS- 231
            |.|.:||....|||.:|.|||:.:.|:|.                    |:...::..|.| |. 
 Worm   168 LFYLINSFSFSIPWSNCANSWSGENCTLGTRIQCKEMNGTLLVNGSCIVEHASSNETTVIPLHDL 232

  Fly   232 ----TVEFFRSMIASTAKGSTSM-SISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMF- 290
                ::::|.:.:...:||.... :::|.:.:.||:.|:.|...|.:.|...|||:..:.::.| 
 Worm   233 GSIPSLKYFHNDVLMLSKGVDDFGTLNWYLGLCVLACWIAVFLCLFQGVKSSGKVVYVAVIVPFI 297

  Fly   291 -------------GFFVAVFLYLLIHEQVTFDTLHYYWMPQLDSFDSILATARTALLMAGGALGP 342
                         |...|||.:|....::..| ||.:....:.:|.|:...:             
 Worm   298 ILTVLLTRLLTLDGSLAAVFYFLTPKWEILMD-LHVWGEAAVQAFYSVSCCS------------- 348

  Fly   343 GWGSIITLSSYNNFRRDAERLSIW-VCLTHITIGLMGLLC--CNVAHDHFEDHVGMMPLHVDEKH 404
              |.:.|::||:.|..:..: .|| |.:..:.:.|:|.|.  ..:....:|..:.:...|:.:..
 Worm   349 --GGLFTIASYSRFHNNIYK-DIWLVLIVDVIVSLVGCLLTFSAIGFTCYEFAISLDKFHIRDGF 410

  Fly   405 HMQFLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEF-ETLRSRRILV 468
            |:.|::|. ..|.|  .:...|:|.|||.||.|......:..:.::::::.||: |.||..|..|
 Worm   411 HLVFVFLA-EALAG--VSVAPLYAGLFFIMILLVVHATQMFVVETIVSSICDEYPERLRRNRRHV 472

  Fly   469 ISSLVFCLTASSVYFCTQLGFSQLTQLPNLAVFTHLLISGILVLMT-TWVYGRVRFQCDLQFMLG 532
            ::::.......|:.||...|...:..|....:...|::...|..|. .||||......:.::::|
 Worm   473 LTTVCALFILLSIPFCLSSGLFWMELLTQFVLTWPLVVIAFLECMAINWVYGVDNMLDNAKWIVG 537

  Fly   533 ---KTISSFKIFFIRFATP-IFLG-LCLFQL--------TYLFTRDRIHDVLIYVSQGLILLTAI 584
               .....:||.| :|..| ::|. ||...|        :|.|....|.......|..|||:..:
 Worm   538 YWPPCYIFWKILF-KFICPMVYLAILCFLWLDWNSIQYESYQFPYWSILTAWCIASFPLILIPIV 601

  Fly   585 SYMVYKVCRTNGDWRQRLQQCLAPHD-WHPVDADNR 619
            .  :::.|...|...|:..:.|.|.| |.|..|.:|
 Worm   602 G--IWQFCIAKGTITQKWWRVLYPDDAWGPAMAIHR 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 133/545 (24%)
snf-6NP_001367976.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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