DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and snf-12

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:639 Identity:133/639 - (20%)
Similarity:250/639 - (39%) Gaps:153/639 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DTLERPYRHDKCRGRWAKSADFYFASC---------THAFSSLIFSELSTFGILHGGWLLFIIAY 127
            |.|....::|: |..|....|| |.||         |..|.:.::.        |||. :|.|.|
 Worm   146 DLLRFSKQNDR-RELWRTQKDF-FLSCLGFMVGVGHTMRFPAKVYQ--------HGGG-VFFIPY 199

  Fly   128 LMGMLFYSLPIFLIQAFLGQFSSSGTISAF-RVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIY 191
            |..::|:.||:..:...|||::.....:|| |:.||..|:|:|::::.:....||:|.....:.|
 Worm   200 LFSLIFFGLPLVFLHLSLGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHY 264

  Fly   192 TVNS-----IHPVIPWMSCNNSWNTQE--CSLHENYDVDDYRVDPHSTVEFFRSMIASTAK-GST 248
            ...|     :...:||.:|.:.|....  |:||..:...:......:...||.|.:.|.:. |..
 Worm   265 FFQSAKGLLLGDELPWETCRDEWQLDNRCCNLHNLHSCFNSTNSITAPEAFFHSEVLSLSTFGDF 329

  Fly   249 SMS-ISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLI---------H 303
            ::. :...:::.:.:.||:|...:.|.:..|.:.:..:..:.:     :.|.:|:         :
 Worm   330 ALGPLQSHLVLSLAAAWLLVFFGVFKGLGSIAQTMNVTATVPY-----LLLSILLLRGISLPGAN 389

  Fly   304 EQVTF-----DTLHYYWMPQLDSFDSILATARTALLMAGGALGPGWGSIITLSSY----NNFRRD 359
            :.:||     .|..:.|.....:.:.:..           .||...|.:|:::::    ||..||
 Worm   390 KGLTFLFTVDSTKLWKWQIWKSAAEQVFY-----------ELGIDAGPLISMAAFSRYRNNIYRD 443

  Fly   360 AERLSIWVCLTHITIGL-----MGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFG- 418
            :..|.|...||....|:     :|.: .:.::.:..|.:         ||..  |||.|:...| 
 Worm   444 SVLLVIMDALTSCLSGMVIFSFVGFI-ASESNSNVNDVL---------KHDP--LYLSFTVYPGV 496

  Fly   419 -RFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFETLRSR----RILVISSLVFCLTA 478
             .|.....|||.|||||:.|:.:.|....:..:.:|..:.| :::::    |:|..    .||..
 Worm   497 TSFMYWGGLWATLFFGMLVLAAIDAEFAWLEMIASAFMNHF-SMKNKAVENRLLAF----LCLAG 556

  Fly   479 SSVYF-----CTQLGFSQLTQLPNLAV----FTHLLISGILVLMTTWVYGRVRFQCDLQFML--- 531
               :|     |.|.|......:.||..    |:..|:|   |.:..:|||...:..|:..||   
 Worm   557 ---FFLGLPLCAQGGIFVFHAIENLNANWNSFSLALLS---VAIVCYVYGIDNYLTDISAMLRVP 615

  Fly   532 --------------------GKTISSFKIFFIRFATPIFLGLCLFQLTYLFTRDRI--------H 568
                                |.....|.:.||   .|:.|.:.|......:.|...        :
 Worm   616 RIQISKATRLKEKLIYFFGPGGIYIKFSLCFI---CPVILTVLLVASVLGYQRISFAGRPIPIDY 677

  Fly   569 DVLIYVSQ--GLILLTAISYMVYKVCRTNG----------DWRQRLQQCLAPHD 610
            :::.::..  .|:::..:::|..:..|..|          :||:.....|.|.|
 Worm   678 EIVAWIVMIGPLLVVPLVAFMQIRQIRNEGKLLKSLFDTSEWRESQDDSLEPKD 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 117/577 (20%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 119/553 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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