DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and snf-12

DIOPT Version :10

Sequence 1:NP_609140.2 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:639 Identity:133/639 - (20%)
Similarity:250/639 - (39%) Gaps:153/639 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DTLERPYRHDKCRGRWAKSADFYFASC---------THAFSSLIFSELSTFGILHGGWLLFIIAY 127
            |.|....::|: |..|....|| |.||         |..|.:.::.        |||. :|.|.|
 Worm   146 DLLRFSKQNDR-RELWRTQKDF-FLSCLGFMVGVGHTMRFPAKVYQ--------HGGG-VFFIPY 199

  Fly   128 LMGMLFYSLPIFLIQAFLGQFSSSGTISAF-RVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIY 191
            |..::|:.||:..:...|||::.....:|| |:.||..|:|:|::::.:....||:|.....:.|
 Worm   200 LFSLIFFGLPLVFLHLSLGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHY 264

  Fly   192 TVNS-----IHPVIPWMSCNNSWNTQE--CSLHENYDVDDYRVDPHSTVEFFRSMIASTAK-GST 248
            ...|     :...:||.:|.:.|....  |:||..:...:......:...||.|.:.|.:. |..
 Worm   265 FFQSAKGLLLGDELPWETCRDEWQLDNRCCNLHNLHSCFNSTNSITAPEAFFHSEVLSLSTFGDF 329

  Fly   249 SMS-ISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLI---------H 303
            ::. :...:::.:.:.||:|...:.|.:..|.:.:..:..:.:     :.|.:|:         :
 Worm   330 ALGPLQSHLVLSLAAAWLLVFFGVFKGLGSIAQTMNVTATVPY-----LLLSILLLRGISLPGAN 389

  Fly   304 EQVTF-----DTLHYYWMPQLDSFDSILATARTALLMAGGALGPGWGSIITLSSY----NNFRRD 359
            :.:||     .|..:.|.....:.:.:..           .||...|.:|:::::    ||..||
 Worm   390 KGLTFLFTVDSTKLWKWQIWKSAAEQVFY-----------ELGIDAGPLISMAAFSRYRNNIYRD 443

  Fly   360 AERLSIWVCLTHITIGL-----MGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFG- 418
            :..|.|...||....|:     :|.: .:.::.:..|.:         ||..  |||.|:...| 
 Worm   444 SVLLVIMDALTSCLSGMVIFSFVGFI-ASESNSNVNDVL---------KHDP--LYLSFTVYPGV 496

  Fly   419 -RFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFETLRSR----RILVISSLVFCLTA 478
             .|.....|||.|||||:.|:.:.|....:..:.:|..:.| :::::    |:|..    .||..
 Worm   497 TSFMYWGGLWATLFFGMLVLAAIDAEFAWLEMIASAFMNHF-SMKNKAVENRLLAF----LCLAG 556

  Fly   479 SSVYF-----CTQLGFSQLTQLPNLAV----FTHLLISGILVLMTTWVYGRVRFQCDLQFML--- 531
               :|     |.|.|......:.||..    |:..|:|   |.:..:|||...:..|:..||   
 Worm   557 ---FFLGLPLCAQGGIFVFHAIENLNANWNSFSLALLS---VAIVCYVYGIDNYLTDISAMLRVP 615

  Fly   532 --------------------GKTISSFKIFFIRFATPIFLGLCLFQLTYLFTRDRI--------H 568
                                |.....|.:.||   .|:.|.:.|......:.|...        :
 Worm   616 RIQISKATRLKEKLIYFFGPGGIYIKFSLCFI---CPVILTVLLVASVLGYQRISFAGRPIPIDY 677

  Fly   569 DVLIYVSQ--GLILLTAISYMVYKVCRTNG----------DWRQRLQQCLAPHD 610
            :::.::..  .|:::..:::|..:..|..|          :||:.....|.|.|
 Worm   678 EIVAWIVMIGPLLVVPLVAFMQIRQIRNEGKLLKSLFDTSEWRESQDDSLEPKD 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_609140.2 SLC5-6-like_sbd 123..610 CDD:444915 117/577 (20%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 119/553 (22%)

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