DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and snf-7

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_499702.2 Gene:snf-7 / 176723 WormBaseID:WBGene00004906 Length:705 Species:Caenorhabditis elegans


Alignment Length:537 Identity:120/537 - (22%)
Similarity:213/537 - (39%) Gaps:123/537 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 GWLLFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAF-RVAPIFKGIGYAILLLNLGTLTYYS 182
            |.|.|:|||::..:.:::|...::..|||:::....:|| |:.||.:|:|:...|:......||.
 Worm    99 GGLSFLIAYVVCGILFAVPAIHMEFALGQYAAKSPPAAFRRMMPILEGVGWMTCLVGAIIGVYYM 163

  Fly   183 IAAVVPLIYTVNSIHPVIPWMSCNNSWN------------------------------TQECSLH 217
            |.....::|..|.|: ......|||.||                              |:..|:|
 Worm   164 IVISWIVLYLFNIIY-ATKISKCNNDWNKNRSTICYEGVKQKLCSGYMLNSSLVMTNLTRNASVH 227

  Fly   218 ENYDVDDYRVDPHS-------TVEFFRSMIASTAKGSTSM-SISWSMLIGVLSIWLVVLALLLKP 274
            ......|.:....:       |.:||.:.:...:.|.|.. ||:..||..|...|::.:..|::.
 Worm   228 SKMMYIDGKCQNATNMKLAVGTEQFFTNFVVKPSTGFTDFNSINVPMLAAVAVCWVIAIISLIRG 292

  Fly   275 VAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTFDTLHYYWMPQLDSF-----------DSILAT 328
            :..|||:...:.:|.:...:|:.:..|..|..: ..||:.:..:.:.:           |..:| 
 Worm   293 MKAIGKLSYYTVLLPYAIIIALMIRGLTLEGAS-TGLHFLFWGKPNEYGHYDFAGLYDPDVWIA- 355

  Fly   329 ARTALLMAGGALGPGWGSIITLSSYN----NFRRDAERLSIWVCLTHITI-------GLMGLLC- 381
               ||:....:|..|.|.::.:.|||    |:.|||  ..:.:|.|.:::       ..:|.|. 
 Worm   356 ---ALMQMCFSLSIGQGGLMNIGSYNKKTYNWYRDA--YLVVLCDTLMSLLGGTAVFSTLGFLAE 415

  Fly   382 ---CNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTT------PNLWAFLFFGMIFL 437
               .::::....:.|      |.|.|.:.|:.         :|..      |.||..|||.|:||
 Worm   416 QRNISISNPKGFNEV------VQEGHALAFIV---------YTEAIAQMPYPFLWYALFFVMLFL 465

  Fly   438 SELCALIIQMMSVITALFDEFETLRSRRILVISSLVFCLTASSVYFCTQL------GFSQLTQLP 496
            ..:...|:.:.:|.:.|.|.|..||..|.:.:      :|.|:.:|...|      ||.......
 Worm   466 LGISTEIVIIETVCSCLADRFHYLRQHRWITV------VTVSTTFFLLGLVMTSDAGFYWFDLYD 524

  Fly   497 NLAVFTHLLI-SGILVLMTTWVYGRVRFQCDLQFM-----------LGKTISSFKIFFIRFATPI 549
            ..:......| :.|:.|...|.||...|:.|::.|           ||.....:.|.: ||.|||
 Worm   525 EYSAGVSATIGTAIMCLTVCWCYGLDNFRADIREMWEEPESRLDKYLGPGAYVWTIVW-RFVTPI 588

  Fly   550 FLGLCLFQLTYLFTRDR 566
                |...:.:.:..|:
 Worm   589 ----CCLVIMFAWIWDK 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 118/533 (22%)
snf-7NP_499702.2 SLC6sbd 70..598 CDD:271359 119/532 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.