DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and snf-5

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_496735.1 Gene:snf-5 / 174923 WormBaseID:WBGene00004904 Length:728 Species:Caenorhabditis elegans


Alignment Length:525 Identity:112/525 - (21%)
Similarity:206/525 - (39%) Gaps:92/525 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PYRHDKCRGRWAKSADFYFASCTHAFSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFLI 141
            |...::.|..:..|.:|...|...|..........|....:|| ..|:|.||.....:.||....
 Worm    75 PEEEEEKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRAYNNGG-SAFLIPYLTCAFLFGLPAVYF 138

  Fly   142 QAFLGQFSSSGTISAF-RVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSI--HPVIPWM 203
            :...||:........| ||.||.:|:|:..:.:......||.:......||.:|..  |..: |.
 Worm   139 EFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYMINICRGHFAL-WS 202

  Fly   204 SCNNSWN--TQECSLHENYDVDDY-RVDPHSTV-------------------------------E 234
            .|||.||  |...::.:.|...:: :|..:||:                               :
 Worm   203 HCNNDWNNGTSCITMADQYLCKNHTKVMANSTLWNSSLPIPDKMVYFNGACQDANGTDVSTATEQ 267

  Fly   235 FFRSMIASTAKGSTSM-SISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFL 298
            :|.:.|...:.|.... ..:|.:...:...||:....:||....:||:...|.::.:...|.:|:
 Worm   268 YFMTYIVQPSSGMLDFGGFNWPVFAAMSVCWLLTGLGILKGAKIMGKISYVSVLVPYVLVVVLFI 332

  Fly   299 YLLIHE------QVTFDTLHYYWMPQLDSFDSILATARTALLMAGGALGPGWGSIITLSSY---- 353
            ..:..:      ::.|.|.:|..:.:.|::..       ||.....:|..|.|.:|:||||    
 Worm   333 NGVFQDGSGVGLEMYFGTPNYTKLYEQDTWTE-------ALKQLCFSLSVGHGGLISLSSYSPKR 390

  Fly   354 NNFRRDAERLSIWVCLTHITIGL---------MGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFL 409
            ||..|||    :.|.:...|:.|         :|.|......| .:|.|         |..:...
 Worm   391 NNIFRDA----LIVIIGDTTMSLVGGGAVFATLGYLAKATGQD-VKDVV---------KSGLSLA 441

  Fly   410 YLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFETLRSRRILVI---SS 471
            ::.:.....|. ..|.||.|:||.|:||......|..:....:.::|::...|:|:.:|:   .|
 Worm   442 FVVYPEAMTRM-PVPWLWCFIFFLMLFLLGASTEIALVDVFCSCIYDQYPRFRNRKWIVVIAWCS 505

  Fly   472 LVFCLTASSVYFCTQLGFSQLTQLPNLAV-FTHL--LISGILVLMTTWVYGRVRFQCDLQFMLGK 533
            :::|:   .:.|.|:.|:.........|. |:.:  ::..:||:|  ::||....:.|:..::|.
 Worm   506 VLYCI---GLVFSTRAGYYWFEMFDEYAAGFSSVCTVVCELLVMM--YIYGFRNVRDDITEVVGH 565

  Fly   534 TISSF 538
            ..:.|
 Worm   566 ARNKF 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 103/479 (22%)
snf-5NP_496735.1 SLC6sbd 83..601 CDD:271359 110/517 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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