DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and snf-3

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_493910.2 Gene:snf-3 / 173493 WormBaseID:WBGene00004902 Length:600 Species:Caenorhabditis elegans


Alignment Length:539 Identity:123/539 - (22%)
Similarity:220/539 - (40%) Gaps:115/539 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFL 140
            ||:|....||..:...:|        |..|.:.        :||. .|::.|::.....::||||
 Worm    30 RGQWTGKFDFLMSMVAYAVGLGNVWRFPYLCYK--------NGGG-SFLVVYMIFFCLAAVPIFL 85

  Fly   141 IQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSC 205
            ::..:||:...|.:..:.:.|:|:|:|...:::....:.|:.:.....:.|.::||..|.||.:|
 Worm    86 MEVTVGQYLQKGAMEMWLMCPLFRGVGIGNVVIAFMCIAYFCVIVAWAMFYMISSIAWVFPWETC 150

  Fly   206 NNSWNTQEC-SLHENYDVDDYRVDPHSTVEFFRSMIASTAKGSTSMS------------------ 251
            ||.||...| :..||:          :.:...::::|| |.|.|..|                  
 Worm   151 NNYWNDATCVTGKENF----------TELARIKALVAS-AGGHTQTSVEQFWEKRVLHDTGDISE 204

  Fly   252 ---ISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIH----EQVTFD 309
               |.|.:...:.:.||:|...|.|.:....|         |.:|.|:|.|:||.    ..:|.:
 Worm   205 FGGIQWELFFIMAAAWLIVYFALWKGITQARK---------FVYFCALFPYVLIFILLIRGLTLE 260

  Fly   310 ----TLHYYWMPQ----LDSFDSILATARTALLMAGGALGPGWGSIITLSSYNNFRRDAERLSIW 366
                .:::|..|.    ||:  ::...|.|.:..   :.|.|:|::|.|.|:|.|..:..:.:|.
 Worm   261 GAGTGIYFYLKPNATRLLDT--AVWKDAGTQVFY---SYGVGFGALIALGSHNKFNHNCFKDAIT 320

  Fly   367 VCL----THITIG-----LMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTT 422
            :|.    |.||.|     ::|          :..||....:....|..:...:|.:..:.... .
 Worm   321 MCFINGCTSITAGFAVFSILG----------YMSHVAQKDISEIVKPGVGLAFLAYPEVASNL-P 374

  Fly   423 TPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFETLRSRRILVISSLVFCLTASSVYFCTQL 487
            ...::|.|||.||.:..|.:.:..|..:.|||.|.|..||..:...:.  :|||    .:||  :
 Worm   375 MKQVFAVLFFLMITILGLDSQVCMMEGLFTALEDAFPILRKYKKQSLG--IFCL----FFFC--I 431

  Fly   488 GFSQLTQLPN--LAVFTHLLISGILVLMTTWV--------YGRVRFQCDLQFMLGKTISSFKIFF 542
            |...:|...:  |.:|.....||..:|...:.        :|....:..|..|:|.|:.....:.
 Worm   432 GIPMVTHSGSHWLTLFDAYGASGYALLFVVFFEVVGLAYGFGAHNIRKALHEMIGVTLPKGIEYV 496

  Fly   543 IRFATP-IFLGLCLFQLTY 560
            .:|..| ..|.|.:|.:.|
 Worm   497 WKFCAPATSLVLFVFCVVY 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 113/492 (23%)
snf-3NP_493910.2 SLC6sbd-TauT-like 30..571 CDD:271387 123/539 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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