DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and Slc6a5

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_976079.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:799 Species:Rattus norvegicus


Alignment Length:627 Identity:158/627 - (25%)
Similarity:255/627 - (40%) Gaps:136/627 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 DKCRGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLP 137
            :|.||.|:...||..:...:|        |..|.|.        :||. .|:|.|||.:....||
  Rat   190 NKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQ--------NGGG-AFLIPYLMMLALAGLP 245

  Fly   138 IFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPW 202
            ||.::..||||:|.|.:|.::..|..:|.|.|:|::::....||::.....|.|...|...|:||
  Rat   246 IFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYLFASFVSVLPW 310

  Fly   203 MSCNNSWNTQECSLHENYDVDDYRVDPHSTVEFFRSMIASTAKGSTSM----------------- 250
            .||||.|||.||.......:|...:..|..::...|....||..:.:|                 
  Rat   311 GSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTMVNFTSQANKTFVSGSEE 375

  Fly   251 -----------------SISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFL 298
                             .|.|.:...:...|::|.|.|.|.:...|||:         :|.|.|.
  Rat   376 YFKYFVLKISAGIEYPGEIRWPLPFCLFLAWVIVYASLAKGIKTSGKVV---------YFTATFP 431

  Fly   299 Y----LLIHEQVTFD----TLHYYWMPQLDSFD--SILATARTALLMAGGALGPGWGSIITLSSY 353
            |    :|:...||..    .:.|:..|:.:...  ::...|.|.:..   :|...||.:||||||
  Rat   432 YVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFF---SLSAAWGGLITLSSY 493

  Fly   354 NNFRRDAERLSIWV-CLTHITIGLMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQ--------FL 409
            |.|..:..|.::.| |....|....|.:..:|        :|.|.  .:.|.:::        ..
  Rat   494 NKFHNNCYRDTLIVTCTNSATSIFAGFVIFSV--------IGFMA--NERKVNIENVADQGPGIA 548

  Fly   410 YLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEF-ETLRSRRILVISSLV 473
            ::.:.....|...:| .||.:||.|:....|..:...:.:::|::.||| :.||:.:      .|
  Rat   549 FVVYPEALTRLPLSP-FWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHK------PV 606

  Fly   474 FCLTASSVYFCTQLGFSQLTQ--------LPNLAVFTHLLISGILVLM-TTWVYGRVRFQCDLQF 529
            |.|.....:|.  :||..:||        :...|....|:|..|..|: .::|||..||..|::.
  Rat   607 FTLGCCICFFI--MGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEM 669

  Fly   530 MLGKTISSFKIFFIRFATPIFLG--LC--LFQ---LTYLFTRDRIHDVLIYVSQGLI---LLTAI 584
            |:|...:.|......|.||..|.  ||  .:|   :||...|        |.:..::   |:.|.
  Rat   670 MIGFQPNIFWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYR--------YPNWSMVLGWLMLAC 726

  Fly   585 SYM------VYKVCRTNGDWRQRLQQCLAPH-DWHPVDADNR 619
            |.:      |.|:....|.:.:||:...:|. ||.|..|.:|
  Rat   727 SVIWIPIMFVIKMYLAPGRFIERLKLVCSPQPDWGPFLAQHR 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 141/566 (25%)
Slc6a5NP_976079.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
SLC6sbd_GlyT2 193..789 CDD:271389 157/624 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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