DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and Slc6a12

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001368835.1 Gene:Slc6a12 / 14411 MGIID:95628 Length:628 Species:Mus musculus


Alignment Length:621 Identity:150/621 - (24%)
Similarity:247/621 - (39%) Gaps:173/621 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KCRGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---------HGGWLLFIIAYLMGMLFYS-- 135
            |.||:|....:|..:         :..|:...|.:         :||...||..::   .|:|  
Mouse    48 KDRGQWTNKMEFVLS---------VAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFI---FFFSCG 100

  Fly   136 LPIFLIQAFLGQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPV 199
            :|:|.::..|||:||.|:::|:| :.|:.:|||.|.:::......||.|.....|.|..:|....
Mouse   101 IPVFFLEVALGQYSSQGSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWE 165

  Fly   200 IPWMSCNNSWNTQEC------------SLHENYDVDDYRVDPHSTVEFFRSMIASTAKGSTSM-S 251
            :||.:|.|||||:.|            |..||:      ..|  .:||:...:.....|...: |
Mouse   166 LPWTTCTNSWNTEHCVDFLNHSSARGVSSSENF------TSP--VMEFWERRVLGITSGIHDLGS 222

  Fly   252 ISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYL----LIHEQVT----F 308
            :.|.:.:.:|..|::....:.|.|...|||:         :|.|.|.||    |:...||    :
Mouse   223 LRWELALCLLLAWIICYFCIWKGVKSTGKVV---------YFTATFPYLMLIILLIRGVTLPGAY 278

  Fly   309 DTLHYYWMPQLDSFDSILATARTALLMAGG-----ALGPGWGSIITLSSYNNFRRDAERLSIWVC 368
            ..:.:|..|.|      |......:.|..|     :.....|.:..|.|||.:..:..|.||.:|
Mouse   279 QGIVFYLKPDL------LRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYRDSIALC 337

  Fly   369 LTHIT------------IGLM----GLLCCNVAHD-------HFEDHVGMMPLHVDEKHHMQFLY 410
            ..:..            :|.|    |:....||..       .|...|.||||            
Mouse   338 FLNSATSFVAGFVVFSILGFMSQEQGIPISEVAESGPGLAFIAFPKAVTMMPL------------ 390

  Fly   411 LCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEF-ETLRS---RRILVISS 471
                         ..||:.|||.|:....|.:..:.|..::||..|.| :.||.   |.:|:::.
Mouse   391 -------------SQLWSCLFFIMLLFLGLDSQFVCMECLVTASMDMFPQQLRKSGRRELLILAI 442

  Fly   472 LVFC-------LTASSVYFCTQLGFSQLTQLPNLAVFTHLLISGILVLMTT--------WVYGRV 521
            .|.|       :|...:|.              ..:|.:...|||.:|..:        ||||..
Mouse   443 SVLCYLMGLLLVTEGGMYI--------------FQLFDYYASSGICLLFLSLFEVICIGWVYGAD 493

  Fly   522 RFQCDLQFMLG-KTISSFKIFFIRFATPIFLGLCL----FQLTYLFTRDRIHDVLIYVSQGLIL- 580
            ||..:::.|:| :.....||.:: |.||   ||||    |.|: .:|..:.::|.:|.|.|..: 
Mouse   494 RFYDNVEDMIGYRPWPLVKISWL-FLTP---GLCLATFFFSLS-KYTPLKYNNVYMYPSWGYSIG 553

  Fly   581 -LTAIS-------YMVYKVCRTNGDWRQRLQQCLAP 608
             |.|.|       :::....:|.|.:::||::.:.|
Mouse   554 WLLAFSSMACVPLFIIITFLKTQGSFKKRLRRLITP 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 141/571 (25%)
Slc6a12NP_001368835.1 SLC5-6-like_sbd 49..589 CDD:382020 148/618 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.