DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and Slc6a3

DIOPT Version :10

Sequence 1:NP_609140.2 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus


Alignment Length:607 Identity:148/607 - (24%)
Similarity:243/607 - (40%) Gaps:124/607 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFL 140
            |..|:|..||..:....|        |..|.:.        :||. .|::.||:.|:...:|:|.
Mouse    60 RETWSKKIDFLLSVIGFAVDLANVWRFPYLCYK--------NGGG-AFLVPYLLFMVIAGMPLFY 115

  Fly   141 IQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSC 205
            ::..||||:..|....:::.|:.||:|:.::|::.....:|::.....|.|..:|....:||:.|
Mouse   116 MELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTMDLPWIHC 180

  Fly   206 NNSWNTQECS--------------------------------LHENYDVDDYRVDPHSTVEFFRS 238
            ||:||:..||                                ||::..:||..............
Mouse   181 NNTWNSPNCSDAHSSNSSDGLGLNDTFGTTPAAEYFERGVLHLHQSRGIDDLGPPRWQLTACLVL 245

  Fly   239 MIA----STAKG-STSMSISWSMLIGVLSIWLVVLALLLKPVAFIGKV--LRCSCVLMFGFFVAV 296
            :|.    |..|| .||..:.|   |.....::|:.||||:.|...|.:  :|.        :::|
Mouse   246 VIVLLYFSLWKGVKTSGKVVW---ITATMPYVVLTALLLRGVTLPGAMDGIRA--------YLSV 299

  Fly   297 FLYLLIHEQVTFDTLHYYWMPQLDSFDSILATARTALLMAGGALGPGWGSIITLSSYNNFRRDAE 361
            ..|.|....|..|                   |.|.:..   :||.|:|.:|..||||.|..:..
Mouse   300 DFYRLCEASVWID-------------------AATQVCF---SLGVGFGVLIAFSSYNKFTNNCY 342

  Fly   362 RLSIWVCLTHITIGLMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFL-------YLCFSYLFGR 419
            |.:|      ||..:..|...:.....| ..:|.|.    :||::...       .|.|......
Mouse   343 RDAI------ITTSINSLTSFSSGFVVF-SFLGYMA----QKHNVPIRDVATDGPGLIFIIYPEA 396

  Fly   420 FTTTP--NLWAFLFFGMIFLSELCALIIQMMSVITALFDEFETLRSRRILVISSLVFCLTASSVY 482
            ..|.|  :.||.:||.|:....:.:.:..|.||||.|.|||:.|...|.|....:|......|::
Mouse   397 IATLPLSSAWAAVFFLMLLTLGIDSAMGGMESVITGLVDEFQLLHRHRELFTLGIVLATFLLSLF 461

  Fly   483 FCTQLGFSQLTQLPNLAVFTHLLISGILV--LMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRF 545
            ..|..|....|.|.:.|..|.:|. |:|:  :...|.||..:|..|::.|.|:..:.:.....:.
Mouse   462 CVTNGGIYVFTLLDHFAAGTSILF-GVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKL 525

  Fly   546 ATPIFLGLCLFQLTYLFTRDRIHDVLIYV----SQGLILLTAISYMV-----YKVCRTNGDWRQR 601
            .:|.|| |.:..::.:..|...:...|:.    :.|.|:.|:...||     ||.|...|.:|::
Mouse   526 VSPCFL-LYVVVVSIVTFRPPHYGAYIFPDWANALGWIIATSSMAMVPIYATYKFCSLPGSFREK 589

  Fly   602 LQQCLAPH-DWHPVD-ADNRRF 621
            |...:.|. |...|| .:.|:|
Mouse   590 LAYAITPEKDRQLVDRGEVRQF 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_609140.2 SLC5-6-like_sbd 123..610 CDD:444915 133/546 (24%)
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:444915 148/607 (24%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 10/28 (36%)

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