DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and Slc6a9

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_006238687.1 Gene:Slc6a9 / 116509 RGDID:621243 Length:638 Species:Rattus norvegicus


Alignment Length:611 Identity:150/611 - (24%)
Similarity:260/611 - (42%) Gaps:123/611 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSLPIFLIQAFL 145
            ||.|....:|...|..:|..   ...:..|..|   :||. .|:..|.:.::|..:|:|.::...
  Rat    32 RGNWGNQIEFVLTSVGYAVG---LGNVWRFPYLCYRNGGG-AFMFPYFIMLVFCGIPLFFMELSF 92

  Fly   146 GQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWN 210
            |||:|.|.:..:|::|:|||:||.:::::.....||::...:...|..:|:..|:||..|||.||
  Rat    93 GQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFSSMTHVLPWAYCNNPWN 157

  Fly   211 TQEC--------------------SLHENYDVDDYRVDPHSTVEFFRSMIASTAKGSTSMSISWS 255
            |.:|                    :|...::....|..|  :.|::|..:...:...........
  Rat   158 TPDCAGVLDASNLTNGSRPTALSGNLSHLFNYTLQRTSP--SEEYWRLYVLKLSDDIGDFGEVRL 220

  Fly   256 MLIGVLSI-WLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLY----LLIHEQVT----FDTL 311
            .|:|.|.: |:||...|::.|...|||:         :|.|.|.|    :|....||    |..:
  Rat   221 PLLGCLGVSWVVVFLCLIRGVKSSGKVV---------YFTATFPYVVLTILFVRGVTLEGAFTGI 276

  Fly   312 HYYWMPQLDSF--DSILATARTALLMAGGALGPGWGSIITLSSYNNFR----RDAERLSIWVCLT 370
            .||..|:.|..  ..:...|.:.:..   :||..||.:||::|||.|.    ||:..:||..|.|
  Rat   277 MYYLTPKWDKILEAKVWGDAASQIFY---SLGCAWGGLITMASYNKFHNNCYRDSVIISITNCAT 338

  Fly   371 HITIG-----LMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTTPNLWAFL 430
            .:..|     ::|.:.         :|:|:....|.: |.....::.:.........:| ||:.|
  Rat   339 SVYAGFVIFSILGFMA---------NHLGVDVSRVAD-HGPGLAFVAYPEALTLLPISP-LWSLL 392

  Fly   431 FFGMIFLSELCALIIQMMSVITALFDEF--ETLRSRRILVISSLVFCLTASSVYFCTQLGFSQLT 493
            ||.|:.|..|......:.:::||:.||.  |.:..::..|...:........:...:|.|...|.
  Rat   393 FFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLL 457

  Fly   494 QLPNLAV-FTHLLISGILVLMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGLCLFQ 557
            .:.|.|. |:.::||.|:.:...::||...:..|:|.|||            |..|:|     ||
  Rat   458 LMDNYAASFSLVVISCIMCVSIMYIYGHRNYFQDIQMMLG------------FPPPLF-----FQ 505

  Fly   558 LTYLFTRDR-IHDVLIY-------------------VSQGLILLTAIS-------YMVYKVCRTN 595
            :.:.|.... |..:||:                   |:.|.::  |:|       |.::::|||:
  Rat   506 ICWRFVSPTIIFFILIFTVIQYRPITYNHYQYPGWAVAIGFLM--ALSSVICIPLYALFQLCRTD 568

  Fly   596 GD-WRQRLQQCLAP-HDWHPVDADNR 619
            || ..|||:....| .||.|...::|
  Rat   569 GDTLLQRLKNATKPSRDWGPALLEHR 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 136/558 (24%)
Slc6a9XP_006238687.1 SLC6sbd_GlyT1 16..599 CDD:212067 150/611 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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