DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and slc6a4l

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_012825214.2 Gene:slc6a4l / 100496361 XenbaseID:XB-GENE-981144 Length:590 Species:Xenopus tropicalis


Alignment Length:609 Identity:162/609 - (26%)
Similarity:247/609 - (40%) Gaps:157/609 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---------------HGGWLLFIIAYLMGMLF 133
            |.:|:|..||.               ||..|..               :||. .|:|.|.:..:|
 Frog    37 RDKWSKKMDFL---------------LSVIGFAVDLGNVWRFPYICYQNGGG-AFLIPYTIMAIF 85

  Fly   134 YSLPIFLIQAFLGQFSSSGTISAF-RVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIH 197
            ..:|:|.::..||||...|.|..: |:.|||||||:||.::.|....||:......|.|..:|..
 Frog    86 GGVPLFYMELALGQFHRMGAIPIWKRICPIFKGIGFAICIIALYVSFYYNTIIAWALFYFYSSFT 150

  Fly   198 PVIPWMSCNNSWNTQECSLH---ENYDVDDYRVDPHSTVEFFRSMIAS--TAKGSTSM-SISWSM 256
            ..:||.:|:|.|||..|:.:   .|...::|...|  ..||:...:..  .|:|..:: .:.|.:
 Frog   151 ETLPWTNCDNPWNTPNCTNYFGRSNITWNNYSKSP--AEEFYTRKVLGIHEAEGLDNVGGLRWQL 213

  Fly   257 LIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQV---TFDTLHYYWMPQ 318
            ::.:..|:.:|...|.|.|...|||:..:..|.:    .|.|.|||....   .:..:.:|..|:
 Frog   214 ILCLFIIFTIVYFSLWKGVKTSGKVVWVTATLPY----VVLLILLIRGATLPGAWRGILFYLRPK 274

  Fly   319 LDSFDSILATA--RTALLMAGGALGPGWGSIITLSSYNNFR----RDAERLSIWVCLTHITIG-- 375
               ::.::.||  ..|......:||||:|.::.|||||.|.    |||...|...|||....|  
 Frog   275 ---WEKLMDTAVWVDAAAQIFFSLGPGFGVLLALSSYNPFHNNCYRDALITSTVNCLTSFVSGFV 336

  Fly   376 ----------LMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTTP----NL 426
                      :.|:...:||.|.     |...|                     |.|.|    |:
 Frog   337 IFTVLGYMAEMRGVEVEDVAKDK-----GPSLL---------------------FITYPEAIANM 375

  Fly   427 WAFLFFGMIFLSELCALIIQ-----MMSVITALFDEFETLRSRR--ILVISSLVFCLTAS----- 479
            ....||.:||...:..|.:.     :.::|||:.||:..:.|:|  :.|:..::.|.|.|     
 Frog   376 VGSTFFAIIFFLMMITLGLDSTFGGLEAIITAVMDEYPHILSKRRELFVLGLVIVCFTGSLSTLT 440

  Fly   480 -----SVYFCTQLGFSQLTQLPNLAVFTHLLISGILVLMTTWVYGRVRFQCDLQFMLGKTISSF- 538
                 .|....|.|    ...|.:||   :.:..|.|   :|.||..||..|::.|||.....| 
 Frog   441 YGGAYVVKLLEQFG----AGCPIIAV---VFLEAIAV---SWFYGIQRFSNDVKSMLGFVPGIFW 495

  Fly   539 KIFFIRFATPIFLG------------LCLFQLTY-LFTRDRIHDVLIYVSQGLILLTAIS----- 585
            :|.::.. :|.||.            |.||...| .:|          ||.| .|:.|.|     
 Frog   496 RICWVAI-SPAFLAFIIVSSLMDQPPLILFDYQYPKWT----------VSVG-FLIGASSFIWIP 548

  Fly   586 -YMVYKVCRTNGDWRQRLQQCLAP 608
             |||||:..|.|..::||..|:.|
 Frog   549 VYMVYKLVWTPGSLKERLAVCVRP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 152/555 (27%)
slc6a4lXP_012825214.2 SLC5-6-like_sbd 37..573 CDD:382020 162/609 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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