DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and slc6a17

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_002933031.1 Gene:slc6a17 / 100490416 XenbaseID:XB-GENE-964419 Length:725 Species:Xenopus tropicalis


Alignment Length:631 Identity:137/631 - (21%)
Similarity:242/631 - (38%) Gaps:157/631 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SEHGTELPGDFIG--EPVETESGGGMGGSLALAARRIRSRQVHSMAVRTGSAYDTLERPYRHDKC 83
            ::|.||...|.:.  ||::.::     .:|.::::..:.:|:...:       :..:||      
 Frog    14 NQHVTESVADLLAHEEPIDHKA-----SALNVSSQDSQPKQLEDSS-------ELEDRP------ 60

  Fly    84 RGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---HGGWLLFIIAYLMGMLFYSLPIFLIQAFL 145
              .|.....:..|...:   |:....:..|..|   :||. .:::.||:.::...:|:|.::..:
 Frog    61 --AWNNKLQYILAQIGY---SVGLGNVWRFPYLCQKNGGG-AYMVPYLILLIIIGIPLFFLELAV 119

  Fly   146 GQFSSSGTISAFR-VAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIPWMSC---- 205
            ||....|:|..:. :.|...|||||..::......||::.....:.|...|....:||..|    
 Frog   120 GQRIRRGSIGVWNYICPRLGGIGYASCVVCFFVGLYYNVIIGWSIFYFFQSFQYPLPWNECPTVK 184

  Fly   206 NNSWNTQECSLHENYDVDDYRVDPHSTVEFF--RSMIASTAKGSTSMSISWSMLIGVLSIWLVVL 268
            |.|.|..|.           ..|..|...||  |..:..:...|....::|.|.:.:|..|.:|.
 Frog   185 NGSVNVVEA-----------ECDKSSATTFFWYREALDISNSISEGGGLNWKMTLCLLVAWTMVC 238

  Fly   269 ALLLKPVAFIGKVLRCS---------CVLMFGFFVAVFLYLLIHEQVTFDTLHYYWMPQLDSF-- 322
            ..::|.:...|||:..|         |.|:.|.|:          :.:.|.:.:...|:::..  
 Frog   239 MAMIKGIQSSGKVMYFSSLFPYVVLICFLIRGLFL----------RGSVDGILHMLTPKVEKMLD 293

  Fly   323 DSILATARTALLMAGGALGPGWGSIITLSSY----NNFRRDAERLSI-----WVCLTHITIGLMG 378
            ..:...|.|.:..   |||.|:|.:|..|||    ||.:.||..:|.     .|..|.:...::|
 Frog   294 PQVWREAATQVFF---ALGLGFGGVIAFSSYNKQDNNCQFDAALVSFINFFTSVLATLVVFAVLG 355

  Fly   379 LLCCNVAHD----------------HFEDHVGMMPLHVDEKH-------------------HMQF 408
            .. .||.::                |..|: .::|.||:..|                   |.|.
 Frog   356 FK-ANVMNEKCVVQNAEKILGYINTHDIDY-SLIPPHVNFSHLTTEDYAKMYQVIKTVKEDHFQD 418

  Fly   409 LYL---------------------CFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVIT 452
            |:|                     .|:.....|..:| .|:.:||.|:....|.::|..|..:||
 Frog   419 LHLDACVLEDELDKAVQGTGLAFIAFTEAMTHFPASP-FWSVMFFFMLINLGLGSMIGTMSGIIT 482

  Fly   453 ALFDEFETLRSRRILVIS--------SLVFCLTASSVYFCTQLGFSQLTQLPNLAVFTHLLISGI 509
            .:.|.|:.  .:.||.:|        .|:| :..|..||.........| ||...|   :::..|
 Frog   483 PIIDTFKV--RKEILTVSCCIVAFLLGLIF-VQRSGNYFVNMFDDYSAT-LPLTIV---VILENI 540

  Fly   510 LVLMTTWVYGRVRFQCDLQFMLGKTISSFKIFFIRFATPIFLGLCL 555
            .|   .||||..:|..:|..|||....|:..:..::.:|||:.:.|
 Frog   541 AV---AWVYGTKKFMQELTEMLGFRPYSYYFYSWKYVSPIFMAILL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 120/524 (23%)
slc6a17XP_002933031.1 SLC6sbd_NTT4 59..647 CDD:271403 129/574 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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