DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13796 and slc6a13

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_002667408.5 Gene:slc6a13 / 100332592 ZFINID:ZDB-GENE-170607-2 Length:621 Species:Danio rerio


Alignment Length:608 Identity:145/608 - (23%)
Similarity:260/608 - (42%) Gaps:110/608 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KCRGRWAKSADFYFASCTHAFSSLIFSELSTFGIL---------HGGWLLFIIAYLMGMLFYSLP 137
            |.||:|:...:|..:         :..|:...|.:         :||. .|.|.||:.:....:|
Zfish    28 KDRGQWSNKLEFVLS---------VAGEIIGLGNVWRFPYLCYKNGGG-AFFIPYLIFLFTCGIP 82

  Fly   138 IFLIQAFLGQFSSSGTISAFR-VAPIFKGIGYA----ILLLNLGTLTYYSIAAVVPLIYTVNSIH 197
            :|.::..|||::|.|.|:.:| ::|:|:|||||    :.|||.    ||.|.....:.|..||..
Zfish    83 VFFLEISLGQYTSEGGITCWRKISPLFEGIGYATQVIVALLNF----YYIIVLAWGIFYLSNSFT 143

  Fly   198 PVIPWMSCNNSWNTQECS--LHENYDVDDYRVDPHST--VEFFRSMIASTAKGSTSM-SISWSML 257
            ..:||.||||:|||:.|.  ...|..||...:|..::  :||:...:...:.|...: ::.|.::
Zfish   144 WNLPWSSCNNTWNTESCMEFQRRNDSVDQSYLDNATSPVIEFWERRVLRISSGIEDIGTLHWDLV 208

  Fly   258 IGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLY----LLIHEQVTFD----TLHYY 314
            :.:|..|::....:.|.|...|||:         :|.|.|.|    :|:...||..    .:.:|
Zfish   209 LCLLLAWVLCYFCIWKGVKSTGKVV---------YFTATFPYVMLLILLIRGVTLPGASRGIQFY 264

  Fly   315 WMPQLDSF--DSILATARTALLMAGGALGPGWGSIITLSSYNNFRRDAERLSIWVCL----THIT 373
            ..|.|...  ..:...|.|.:..:....   .|.:..|.|||.:..:..|.|:.:|.    |...
Zfish   265 LYPDLGRLADPQVWMDAGTQIFFSYAIC---LGCLTALGSYNKYNNNCYRDSLALCFLNSGTSFV 326

  Fly   374 IG-----LMGLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTTPNLWAFLFFG 433
            .|     ::|.:       .:|.:|   |:....:......::.:.........:| |||..||.
Zfish   327 AGFAIFSILGFM-------SYEQNV---PISEVAESGPGLAFIAYPRAVSMMPISP-LWACFFFI 380

  Fly   434 MIFLSELCALIIQMMSVITALFDEFETL---RSRRILVISSLVFCLTASSVYFCTQLGFSQLTQ- 494
            ||.|..|.:..:.:.|::||:.|.:.:.   ::||.|:|      |..:.|.|.  :|...||: 
Zfish   381 MIVLLGLDSQFVCVESLVTAMVDMYPSFFRRKNRRELLI------LVVAIVSFL--VGLIMLTEG 437

  Fly   495 -LPNLAVFTHLLISGILVLMT--------TWVYGRVRFQCDLQFMLGKTISSF-KIFFIRFATPI 549
             :....:|.:...||:.:|..        .|:||..||..:::.|:|.....: |..::.|....
Zfish   438 GMYVFQLFDYYAASGMCLLFVAIFETVCIAWIYGANRFYDNIEDMIGYRPGPYIKYCWLFFTPAT 502

  Fly   550 FLGLCLFQLTYLFTRDRIHDVLIYVSQGLIL--LTAIS-------YMVYKVCRTNGDWRQRLQQC 605
            ..|...|.| ..:|..:.::..:|...|..|  :.|:|       :::|::..|.|...:|:|..
Zfish   503 CFGTFAFSL-IKYTPLKYNNEYVYPWWGYALGWMLALSSMICVPLWVIYRMGTTKGSLMERVQFL 566

  Fly   606 LAPHDWHPVDADNRRFYEEIMGI 628
            :.|   .|....:||..|::..:
Zfish   567 IRP---SPDLPKSRREQEKLQAV 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 132/538 (25%)
slc6a13XP_002667408.5 SLC6sbd-TauT-like 30..569 CDD:271387 139/584 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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