DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13796 and si:ch211-117c9.5

DIOPT Version :9

Sequence 1:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_001922963.4 Gene:si:ch211-117c9.5 / 100150452 ZFINID:ZDB-GENE-110408-2 Length:652 Species:Danio rerio


Alignment Length:683 Identity:155/683 - (22%)
Similarity:267/683 - (39%) Gaps:167/683 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GDCEN-SEHGTELPGDFIGEPVETESGGGMGGSLALAARRIRSRQVHSMAVRTGSAYDTLERPYR 79
            |.||: |:...|     :..|:.:|:.|        :...:....|.:..|.||.  .|.|..:.
Zfish    12 GSCEDESQEDAE-----VARPLVSETEG--------SNTDVAEPSVCAGLVDTGD--PTAELGHS 61

  Fly    80 HDKCRGRWAKSADFYFASCTHA--------FSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSL 136
            .   |..|::..||..:....|        |..|.:.        :||. :|:|.|::.:.|..:
Zfish    62 D---RQTWSRQMDFIMSCVGFAVGLGNVWRFPYLCYK--------NGGG-VFLIPYILMVFFGGI 114

  Fly   137 PIFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAVVPLIYTVNSIHPVIP 201
            |:|.::..||||...|.::.:.:||:|||:|.|.:::.....|||.:..|..|.:..:|....:|
Zfish   115 PVFFLEIALGQFMKQGGVATWNIAPLFKGLGLASMVIVFFCNTYYIMVLVWGLYFLAHSFTSSLP 179

  Fly   202 WMSCNNSWNTQECSL------------HEN---YDVDDYRVDP----HSTVEFFRSMIASTAKGS 247
            |.:|.:.|||..|:.            |.|   .::....::|    .|.:||:...:...:.|.
Zfish   180 WATCGHEWNTINCTTNFSRVCFNQSPSHPNNSSLNISAGCLEPTGLRSSVMEFWERKVLRLSGGL 244

  Fly   248 TSM-SISWSMLIGVLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVTF--- 308
            ..: .||..|::.:|:.|::|...:.|.|...|||:         :|.|||.||::  .|.|   
Zfish   245 DEVGDISGHMVLCLLATWIIVYFCIWKGVKSAGKVV---------YFTAVFPYLVL--VVLFVHG 298

  Fly   309 -------DTLHYYWMPQLDSFD--SILATARTALLMAGGALGPGWGSIITLSSYNNFRRDAERLS 364
                   :.:.||..|......  .:...|.|.:..   :...|.|::..|.|||.|..:..:.:
Zfish   299 VSLPGAINGIIYYLKPNWSKLSEAQVWIDAATQIFF---SYAIGLGALTALGSYNRFNNNCYQDA 360

  Fly   365 IWVCLTH---------ITIGLMGLLCC-------NVAHD-------HFEDHVGMMPLHVDEKHHM 406
            ..:.|.:         :...::|.:..       |||..       .:...|.:|||        
Zfish   361 FILALINSGTSFFAGFVVFSVLGFMAAEQDVDISNVAESGPGLAFIAYPKAVSLMPL-------- 417

  Fly   407 QFLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCALIIQMMSVITALFDEFE------TLRSRR 465
                            .| |||.|||.|:.:..|.:..:.:...||.:.|...      :|| |.
Zfish   418 ----------------AP-LWAVLFFLMLLVLGLDSQFVGVEGFITGIMDMLPPKSFIGSLR-RE 464

  Fly   466 ILVISSLVFCLTASSVYFCTQLGFSQLTQ--LPNLAVFTHLLISGILVL--------MTTWVYGR 520
            ::|   .:.|.|      |..:..|.:|:  :....:|.:...|||.:|        :..||||.
Zfish   465 VVV---AICCFT------CFTIDLSMVTEGGMYVFQLFDYYSASGITLLWQAFWECVVVAWVYGA 520

  Fly   521 VRFQCDLQFMLGKTISSFKIFFIRFATPIF-LGLCLFQLTYLFTRDRIHDVLIYVSQGLIL--LT 582
            .||..|:..|:|.....:..:...:.||:. :|:.||.:.. :.|...:.|.:|...|..|  ..
Zfish   521 DRFMDDVACMIGYRPLPYMKWCWSYITPVVCMGVFLFHVVN-YKRLVYNAVYVYPWWGEALGWFL 584

  Fly   583 AISYM-------VYKVCRTNGDWRQRLQQCLAP 608
            |:|.|       :||:....|...:|.|....|
Zfish   585 ALSSMLCIPLTVLYKLLHCKGSLMERWQHLTTP 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 132/567 (23%)
si:ch211-117c9.5XP_001922963.4 SLC5-6-like_sbd 63..652 CDD:294310 141/614 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.