DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13795 and Slc6a2

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_112633.2 Gene:Slc6a2 / 83511 RGDID:621822 Length:617 Species:Rattus norvegicus


Alignment Length:600 Identity:142/600 - (23%)
Similarity:265/600 - (44%) Gaps:73/600 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWDKPTDFMFACFGLALKLDVFVASFWMF-----FDMGILGILPYFVYMSIYLVPIMVIHSFM 79
            |..|.|..||:.:..|.|:.|    |:.|.|     .:.|...::||.:::.|..:|:..:...:
  Rat    56 RETWGKKIDFLLSVVGFAVDL----ANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELAL 116

  Fly    80 GQFSSSGFISAFRLSPFFKGMGYVSGFLTISMLIYYSIFAAVPLLFIINSFRPTLPWSCEGLSSW 144
            |||:..|..:.:::.|||||:||....:.:.:..||::..|..|.::..||...|||:..| .:|
  Rat   117 GQFNREGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCG-HAW 180

  Fly   145 HNGSATLSSSCNKTLILEDFSEYNRSHQLLHVPSVLYFQN-----HYDSMQQD-AVPDWYKDYEL 203
            ::.:.|.....|.: :|.|.::|::   ....|:..:::.     |..|...| .:|.|.     
  Rat   181 NSPNCTDPKLLNAS-VLGDHTKYSK---YKFTPAAEFYERGVLHLHESSGIHDIGLPQWQ----- 236

  Fly   204 SWHFVGLFAIIWVVIAFIFYKFSETAK-FGKLIRYMVIVTLVLLLVCFVRFLFLPGALNGLHRYV 267
                  |...:.|||..:::...:..| .||::.....:...:|.|..|..:.||||.||::.|:
  Rat   237 ------LLLCLMVVIVVLYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYL 295

  Fly   268 TPKASDMAMGVV--STFIMVLHAFGAGWGSVITLSSFNGFKTD-------IMSYSWIISFGQIFI 323
            ......:....|  .....:..:.|||:|.:|..:|:|.|..:       ..:.:.:.||  |..
  Rat   296 HIDFYRLKEATVWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSF--ISG 358

  Fly   324 YIMFGMVSFMLEHYFNELSDVDDNGHVLSHWLLYLSSASALSTMAWPNLWTFIYYSMLLIAALIV 388
            :.:|.::.:|...:..::.||...|    ..|:::....|:||::....|..:::.|||...|..
  Rat   359 FAIFSILGYMAHEHKVKIEDVATEG----AGLVFVLYPEAISTLSGSTFWAVLFFLMLLALGLDS 419

  Fly   389 MTTQIFTVLQSLFDEFEVLRVRKQEVTFGLIGGIALCSFYFCTNHGIIFFSALGLDAIFSHSLLH 453
            ....:..|:..|.|:|:||:..::..|..:..|..|.:.:..|..||...:.|...|..:..|..
  Rat   420 SMGGMEAVITGLADDFQVLKRHRKLFTCAVTLGTFLLAMFCITKGGIYVLTLLDTFAAGTSILFA 484

  Fly   454 LLLLLV-VLWIYGRERFQRDIEFMLG-QPFASWKVFILRFIAPIILVICLLAGI----ALSISEH 512
            :|:..: |.|.||.:||..||:.|:| :|...|:: ..:|::|..|:..::..|    .|:..::
  Rat   485 VLMEAIGVSWFYGVDRFSNDIQQMMGFKPGLYWRL-CWKFVSPAFLLFVVVVSIINFKPLTYDDY 548

  Fly   513 SYSTTV------VFVMSIVLVVLPILAIPGYGFYYLYQSTGTFCERFKRTCRPTDWYPVEMEHRQ 571
            .|....      :.:.|::||       |.|..|..:...|:..||......|      |.||..
  Rat   549 VYPPWANWVGWGIALSSMILV-------PAYVIYKFFSIRGSLWERVAYGITP------ENEHHL 600

  Fly   572 QYEEAVDNTEMTHQL 586
            ..:..|...::.|.|
  Rat   601 VAQRDVRQFQLRHWL 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 120/500 (24%)
Slc6a2NP_112633.2 SLC5-6-like_sbd 56..615 CDD:444915 141/598 (24%)

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