DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13795 and slc6a4b

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001170930.1 Gene:slc6a4b / 664770 ZFINID:ZDB-GENE-060314-2 Length:591 Species:Danio rerio


Alignment Length:595 Identity:141/595 - (23%)
Similarity:250/595 - (42%) Gaps:102/595 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NRGKWDKPTDFMFACFGLALKLDVFVASFWMFFDMGILGILPYFVYMS---IYLVPIMVIHSF-- 78
            :|.||.|..||:.:..|.|:.|    .:.|.|         ||..|.:   .:|:|.:::..|  
Zfish    37 SRDKWSKKMDFLLSVIGFAVDL----GNVWRF---------PYICYQNGGGAFLIPYVLMAVFGG 88

  Fly    79 ---------MGQFSSSGFISAFR-LSPFFKGMGYVSGFLTISMLIYYSIFAAVPLLFIINSFRPT 133
                     :|||..:|.||.:: :.|.|||:|:....:.:.:..||:...|..|.:..:||..|
Zfish    89 VPLFYMELALGQFHRTGAISIWKHICPIFKGIGFAICIIALYVSFYYNTIIAWALFYFYSSFSST 153

  Fly   134 LPW-SCEGLSSWHNGSAT-LSSSCNKTLILEDFSEYNRS-------------HQLLHVPSVLYFQ 183
            ||| ||:  :.|:..:.| .....|.|     ::.|:||             |:...:.:|.|  
Zfish   154 LPWTSCD--NDWNTENCTNYFGKDNVT-----WTNYSRSPAEEFYTRNVLAVHESSGLGNVGY-- 209

  Fly   184 NHYDSMQQDAVPDWYKDYELSWHFVGLFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVTLVLLLV 248
                               :.|..:....:|:.::.|..:|..:|:  ||::.....:..|:||:
Zfish   210 -------------------IRWQLMLCLFLIFTIVYFSLWKGVKTS--GKVVWVTATLPYVVLLI 253

  Fly   249 CFVRFLFLPGALNGLHRYVTPKASDM--AMGVVSTFIMVLHAFGAGWGSVITLSSFNGFKTDIMS 311
            ..:|...||||..|:..|:.||...:  ....|.....:..:.|.|:|.::.|||:|.|..:...
Zfish   254 LMIRGATLPGAWKGVVFYLNPKWEKLKETSVWVDAAAQIFFSLGPGFGVLLALSSYNPFTNNCYR 318

  Fly   312 YSWIISFGQIFIYIMFGMVSFMLEHYFNELSDVD------DNGHVLSHWLLYLSSASALSTMAWP 370
            .:.:.|........:.|.|.|.:..|..|..:|:      |.|..    ||:::...|::.|...
Zfish   319 DAIVTSLVNCLTSFVSGFVIFTVLGYMAEQRNVNVEDVARDKGPS----LLFITYPEAIANMVGS 379

  Fly   371 NLWTFIYYSMLLIAALIVMTTQIFTVLQSLFDEF-EVLRVRKQEVTFGLIGGIALCSFYFCTNHG 434
            ..:..|::.|::...|......:..::.::.||: :||..|::....||:....|.|....|..|
Zfish   380 TFFAIIFFVMMITLGLDSTFGGLEAIITAVMDEYPDVLSHRRELFVLGLVVVCFLGSLSTLTKGG 444

  Fly   435 IIFFSALGLDAIFSHSLLHLLLL--LVVLWIYGRERFQRDIEFMLG-QPFASWKVFILRFIAPII 496
            ......|....:.| |::.::.|  ..|.|.||..||..||:.||| .|...|||..:. |:|..
Zfish   445 AYVVKLLEEFGVGS-SIIAIVFLEATAVSWFYGINRFSNDIKSMLGYTPGLFWKVCWVA-ISPAF 507

  Fly   497 LVICLLAGI----ALSISEHSY---STTVVFVMSIVLVVLPILAIPGYGFYYLYQSTGTFCERFK 554
            |...:::.:    .|::.::.:   |.||.:::.    ....:.||.|..|.|..:.|:..:|..
Zfish   508 LAYIIISSLLNPQTLTLFDYEFPDWSITVGYIIG----ASSFIWIPIYMVYKLVWTPGSLKQRLA 568

  Fly   555 RTCRPTDWYP 564
            ...||....|
Zfish   569 VCLRPERTLP 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 123/519 (24%)
slc6a4bNP_001170930.1 SLC6sbd_SERT 38..574 CDD:271399 139/588 (24%)

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