DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13795 and slc6a4a

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:595 Identity:144/595 - (24%)
Similarity:251/595 - (42%) Gaps:84/595 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVYETSYDTGHKPFSPDLNRGKWDKPTDFMFACFGLALKLDVFVASFWMF-----FDMGILGILP 60
            :|.:||.|.         .|..|.|..||:.:..|.|:.|    .:.|.|     .:.|...:||
Zfish    81 VVQQTSLDP---------PRETWSKKMDFLLSVIGYAVDL----GNVWRFPYICYQNGGGAFLLP 132

  Fly    61 YFVYMSIYLVPIMVIHSFMGQFSSSGFISAFR-LSPFFKGMGYVSGFLTISMLIYYSIFAAVPLL 124
            |.:......||:..:...:|||..||.||.:: :.|.|||:|:....:.:.:..||:...|..|.
Zfish   133 YLLMAVFGGVPLFYMELALGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALY 197

  Fly   125 FIINSFRPTLPW-SCEGLSSWHNGSAT--LSSSCNKTLILEDFSEYNRSHQLLHVPSVLYFQNHY 186
            ::::|||.|||| :|.  :.|:..:.|  ||:..|.:......|....    .:|..||  |.|.
Zfish   198 YLLSSFRATLPWTTCN--NRWNTPNCTHYLSTDLNVSWTNNSISPAEE----FYVRQVL--QVHL 254

  Fly   187 DSMQQDAVPDWYKDYELSWHFVGLFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVTLVLLLVCFV 251
            .       |..::...:||........|:.|:.|..:|..:|:  ||::........::||:..:
Zfish   255 S-------PGLHQLGWVSWQLALCLLFIFTVVYFSIWKGVKTS--GKVVWVTATFPYLVLLILLI 310

  Fly   252 RFLFLPGALNGLHRYVTPKASDMAMGVV--STFIMVLHAFGAGWGSVITLSSFNGFKTDIMSYSW 314
            |...||||..|:..|:.|....:....|  .....:..:.|.|:|.::..:|:|.|..:....:.
Zfish   311 RGATLPGAWRGVVFYLKPDWKKLLTTTVWLDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDAL 375

  Fly   315 IISFGQIFIYIMFGMVSFMLEHYFNEL--SDVDDNGHVLSHWLLYLSSASALSTMAWPNLWTFIY 377
            |.|........:.|.|.|.:..|..|:  ..|:.........||::..|.|::.|.....:..|:
Zfish   376 ITSSVNCLTSFLSGFVIFTVLGYMAEMRQQGVETVAKDAGPSLLFIIYAEAIANMPAATFFAIIF 440

  Fly   378 YSMLLIAALIVMTTQIFTVLQSLFDEFEVLRVRKQE-VTFGLI-------------GGIALCSFY 428
            :.|:::..|......:..|:.::.|||..|..|::| ...||:             ||..:...:
Zfish   441 FLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGLVCVCYLGALSTLTYGGAFVVKLF 505

  Fly   429 --FCTNHGIIFFSALGLDAIFSHSLLHLLLLLVVLWIYGRERFQRDIEFMLG-QPFASWKVFILR 490
              :.|...:|       ..:|       |.::.|.|.||..||..|::.||| .|...|:|..:.
Zfish   506 EEYATGPAVI-------TVVF-------LEVIAVSWFYGTTRFCNDVQLMLGFAPGLFWRVCWIA 556

  Fly   491 FIAPIILVICLLAGIA----LSISEHSYS--TTVVFVMSIVLVVLPILAIPGYGFYYLYQSTGTF 549
             |.|..|:..:::.:|    :.:.::.|.  ||   |:...:.|...:.:|.|..|:|..:.|||
Zfish   557 -ICPCFLLFIIVSFLAFPPEVKLFDYLYPFWTT---VLGYCIGVSSFICVPSYMVYHLVTTKGTF 617

  Fly   550 CERFKRTCRP 559
            .:|..:...|
Zfish   618 QQRLLKGITP 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 122/507 (24%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:444915 140/576 (24%)

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