DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13795 and Slc6a17

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:658 Identity:133/658 - (20%)
Similarity:241/658 - (36%) Gaps:180/658 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NRGKWDKPTDFMFACFGLALKLDVFVASFWMF-----FDMGILGILPYFVYMSIYLVPIMVIHSF 78
            :|..|:....::.|..|.::.|    .:.|.|     .:.|...::||.|.:.|..:|:..:...
  Rat    59 DRPAWNSKLQYILAQIGFSVGL----GNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELA 119

  Fly    79 MGQFSSSGFISAFR-LSPFFKGMGYVSGFLTISMLIYYSIFAAVPLLFIINSFRPTLPWS-CEGL 141
            :||....|.|..:. :.|...|:|:.|..:.:.:.:||::.....:.:...||:..|||| |..:
  Rat   120 VGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWSECPVI 184

  Fly   142 SSWHNGS-ATLSSSCNKTLILEDFSEYNRSHQLLHVPSVLYFQNHYDSMQQDAVPDWYKDY---- 201
               .||: |.:...|.|:                  .:..||              ||::.    
  Rat   185 ---RNGTVAVVEPECEKS------------------SATTYF--------------WYREALDIS 214

  Fly   202 -------ELSWHFVGLFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVTLVLLLVCFVRFLFLPGA 259
                   .|:|.......:.|.::.....|..:::  ||::.:..:...|:|....||.|.|.||
  Rat   215 NSISESGGLNWKMTVCLLVAWSIVGMAVVKGIQSS--GKVMYFSSLFPYVVLACFLVRGLLLRGA 277

  Fly   260 LNGLHRYVTPKASDMAMGVV--STFIMVLHAFGAGWGSVITLSSFN------------------- 303
            ::|:....|||...|....|  .....|..|.|.|:|.||..||:|                   
  Rat   278 VDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFF 342

  Fly   304 -------------GFKTDIMSYSWIISFGQ-IFIYI--------------------------MFG 328
                         |||.:||:...::...: |..|:                          |:.
  Rat   343 TSVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLTTKDYSEMYN 407

  Fly   329 MVSFMLEHYFNEL--------SDVDDNGHVLSHWLLYLSSASALSTMAWPNLWTFIYYSMLLIAA 385
            ::..:.|..|:.|        .::|.:  |....|.:::...|::.......|:.:::.||:...
  Rat   408 VIMTVKEKQFSALGLDPCLLEDELDKS--VQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLG 470

  Fly   386 LIVMTTQIFTVLQSLFDEFEVLRVRKQEVTFGLIGGIALCSFYFCTNHGIIFFSALG-------- 442
            |..|...:..:...:.|.|   :|.|:..|.|      .|.|.|..  |::|....|        
  Rat   471 LGSMIGTMAGITTPIIDTF---KVPKEMFTVG------CCVFAFFV--GLLFVQRSGNYFVTMFD 524

  Fly   443 -LDAIFSHSLLHLLLLLVVLWIYGRERFQRDIEFMLG-QP----FASWKVFILRFIAPIILVICL 501
             ..|....:::.:|..:.|.||||.::|.:::..||| :|    |..||     |::|:.:.:..
  Rat   525 DYSATLPLTVIVILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFYMWK-----FVSPLCMAVLT 584

  Fly   502 LAG-IALSISEHSYSTTV--------------VFVMSIVLVVLPILAIPGY----GFYYLYQSTG 547
            .|. |.|.:|...||..:              ...:.|.|:.:..|.||..    .|:.|...:.
  Rat   585 TASIIQLGVSPPGYSAWIKEEAAERYLYFPNWAMALLITLIAVATLPIPVVFILRHFHLLSDGSN 649

  Fly   548 TFCERFKR 555
            |....:|:
  Rat   650 TLSVSYKK 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 117/580 (20%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 131/646 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.

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